Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 Mospd4-201ENSMUST00000180618 576 ntBASIC11.69□□□□□ -0.54
Tnfrsf1bP25119 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC11.69□□□□□ -0.54
Tnfrsf1bP25119 Gm43438-201ENSMUST00000198133 379 ntBASIC11.69□□□□□ -0.54
Tnfrsf1bP25119 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Tnfrsf1bP25119 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC11.69□□□□□ -0.54
Tnfrsf1bP25119 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Tnfrsf1bP25119 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tnfrsf1bP25119 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Tnfrsf1bP25119 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tnfrsf1bP25119 Gm43823-201ENSMUST00000197391 1808 ntBASIC11.69□□□□□ -0.54
Tnfrsf1bP25119 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tnfrsf1bP25119 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tnfrsf1bP25119 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC11.69□□□□□ -0.54
Tnfrsf1bP25119 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC11.69□□□□□ -0.54
Tnfrsf1bP25119 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tnfrsf1bP25119 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tnfrsf1bP25119 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC11.69□□□□□ -0.54
Tnfrsf1bP25119 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Tnfrsf1bP25119 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Tnfrsf1bP25119 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Tnfrsf1bP25119 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tnfrsf1bP25119 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tnfrsf1bP25119 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tnfrsf1bP25119 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tnfrsf1bP25119 Gm3756-201ENSMUST00000169182 1355 ntBASIC11.68□□□□□ -0.54
Tnfrsf1bP25119 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Tnfrsf1bP25119 Gm42853-201ENSMUST00000201273 1387 ntBASIC11.68□□□□□ -0.54
Tnfrsf1bP25119 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Tnfrsf1bP25119 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tnfrsf1bP25119 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Tnfrsf1bP25119 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tnfrsf1bP25119 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tnfrsf1bP25119 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC11.68□□□□□ -0.54
Tnfrsf1bP25119 Gm10434-201ENSMUST00000101158 471 ntBASIC11.68□□□□□ -0.54
Tnfrsf1bP25119 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Tnfrsf1bP25119 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Tnfrsf1bP25119 Gm13394-201ENSMUST00000121658 1000 ntBASIC11.68□□□□□ -0.54
Tnfrsf1bP25119 Gm5863-201ENSMUST00000121760 1008 ntBASIC11.68□□□□□ -0.54
Tnfrsf1bP25119 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC11.68□□□□□ -0.54
Tnfrsf1bP25119 Gm13316-201ENSMUST00000140537 691 ntBASIC11.68□□□□□ -0.54
Tnfrsf1bP25119 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Tnfrsf1bP25119 Gm29396-201ENSMUST00000185659 716 ntBASIC11.68□□□□□ -0.54
Tnfrsf1bP25119 Gm6546-201ENSMUST00000192096 766 ntBASIC11.68□□□□□ -0.54
Tnfrsf1bP25119 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC11.68□□□□□ -0.54
Tnfrsf1bP25119 Gm44405-201ENSMUST00000198952 126 ntBASIC11.68□□□□□ -0.54
Tnfrsf1bP25119 Olfr284-202ENSMUST00000206647 966 ntBASIC11.68□□□□□ -0.54
Tnfrsf1bP25119 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Tnfrsf1bP25119 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC11.68□□□□□ -0.54
Tnfrsf1bP25119 Gm18935-201ENSMUST00000212692 664 ntBASIC11.68□□□□□ -0.54
Tnfrsf1bP25119 Gm45925-201ENSMUST00000218882 744 ntBASIC11.68□□□□□ -0.54
Tnfrsf1bP25119 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tnfrsf1bP25119 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Tnfrsf1bP25119 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tnfrsf1bP25119 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tnfrsf1bP25119 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tnfrsf1bP25119 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Tnfrsf1bP25119 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
Tnfrsf1bP25119 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Tnfrsf1bP25119 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tnfrsf1bP25119 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC11.68□□□□□ -0.54
Tnfrsf1bP25119 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tnfrsf1bP25119 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tnfrsf1bP25119 AC116503.1-201ENSMUST00000215445 2192 ntBASIC11.68□□□□□ -0.54
Tnfrsf1bP25119 Gm6210-201ENSMUST00000204734 1942 ntBASIC11.68□□□□□ -0.54
Tnfrsf1bP25119 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Tnfrsf1bP25119 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tnfrsf1bP25119 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Tnfrsf1bP25119 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Tnfrsf1bP25119 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tnfrsf1bP25119 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tnfrsf1bP25119 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tnfrsf1bP25119 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tnfrsf1bP25119 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tnfrsf1bP25119 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tnfrsf1bP25119 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tnfrsf1bP25119 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Tnfrsf1bP25119 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC11.67□□□□□ -0.54
Tnfrsf1bP25119 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tnfrsf1bP25119 Gm43858-201ENSMUST00000199418 1778 ntBASIC11.67□□□□□ -0.54
Tnfrsf1bP25119 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC11.67□□□□□ -0.54
Tnfrsf1bP25119 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC11.67□□□□□ -0.54
Tnfrsf1bP25119 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Tnfrsf1bP25119 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Tnfrsf1bP25119 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Tnfrsf1bP25119 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tnfrsf1bP25119 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Tnfrsf1bP25119 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tnfrsf1bP25119 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tnfrsf1bP25119 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC11.67□□□□□ -0.54
Tnfrsf1bP25119 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tnfrsf1bP25119 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Tnfrsf1bP25119 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Tnfrsf1bP25119 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC11.67□□□□□ -0.54
Tnfrsf1bP25119 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Tnfrsf1bP25119 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC11.67□□□□□ -0.54
Tnfrsf1bP25119 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC11.67□□□□□ -0.54
Tnfrsf1bP25119 Gm8801-201ENSMUST00000173255 1064 ntBASIC11.67□□□□□ -0.54
Tnfrsf1bP25119 Gm27501-201ENSMUST00000183599 107 ntBASIC11.67□□□□□ -0.54
Tnfrsf1bP25119 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Tnfrsf1bP25119 Gm37489-201ENSMUST00000191883 159 ntBASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms