Protein–RNA interactions for Protein: P23198

Cbx3, Chromobox protein homolog 3, mousemouse

Known RBP Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx3P23198 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cbx3P23198 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC11.48□□□□□ -0.57
Cbx3P23198 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cbx3P23198 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cbx3P23198 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Cbx3P23198 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cbx3P23198 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cbx3P23198 Sox13-203ENSMUST00000144386 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cbx3P23198 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Cbx3P23198 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Cbx3P23198 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Cbx3P23198 AC154314.2-201ENSMUST00000223677 3502 ntBASIC11.47□□□□□ -0.57
Cbx3P23198 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cbx3P23198 Cd6-203ENSMUST00000080292 3032 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cbx3P23198 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC11.47□□□□□ -0.57
Cbx3P23198 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cbx3P23198 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cbx3P23198 Scnn1b-201ENSMUST00000033161 2478 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cbx3P23198 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cbx3P23198 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Cbx3P23198 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cbx3P23198 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Cbx3P23198 Gm5466-201ENSMUST00000119395 1890 ntBASIC11.47□□□□□ -0.57
Cbx3P23198 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Cbx3P23198 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cbx3P23198 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Cbx3P23198 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cbx3P23198 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cbx3P23198 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC11.47□□□□□ -0.57
Cbx3P23198 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cbx3P23198 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cbx3P23198 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Cbx3P23198 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Cbx3P23198 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cbx3P23198 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Cbx3P23198 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cbx3P23198 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Cbx3P23198 Fsd2-201ENSMUST00000042318 3985 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Cbx3P23198 Gm25287-201ENSMUST00000103846 110 ntBASIC11.47□□□□□ -0.57
Cbx3P23198 Gm22918-201ENSMUST00000103855 110 ntBASIC11.47□□□□□ -0.57
Cbx3P23198 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Cbx3P23198 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC11.47□□□□□ -0.57
Cbx3P23198 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC11.47□□□□□ -0.57
Cbx3P23198 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cbx3P23198 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC11.47□□□□□ -0.57
Cbx3P23198 Gm24158-201ENSMUST00000175263 71 ntBASIC11.47□□□□□ -0.57
Cbx3P23198 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC11.47□□□□□ -0.57
Cbx3P23198 Gm35960-201ENSMUST00000202712 767 ntBASIC11.47□□□□□ -0.57
Cbx3P23198 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cbx3P23198 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Cbx3P23198 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cbx3P23198 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
Cbx3P23198 Srp54a-207ENSMUST00000110708 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cbx3P23198 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cbx3P23198 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
Cbx3P23198 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cbx3P23198 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cbx3P23198 Gm29100-201ENSMUST00000187564 4410 ntBASIC11.47□□□□□ -0.57
Cbx3P23198 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cbx3P23198 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cbx3P23198 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Cbx3P23198 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC11.47□□□□□ -0.57
Cbx3P23198 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cbx3P23198 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cbx3P23198 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Cbx3P23198 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cbx3P23198 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Cbx3P23198 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Cbx3P23198 AC121870.2-201ENSMUST00000214343 1870 ntBASIC11.46□□□□□ -0.57
Cbx3P23198 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Cbx3P23198 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cbx3P23198 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cbx3P23198 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cbx3P23198 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cbx3P23198 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cbx3P23198 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cbx3P23198 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cbx3P23198 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Cbx3P23198 Tmed9-203ENSMUST00000224741 1450 ntBASIC11.46□□□□□ -0.57
Cbx3P23198 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cbx3P23198 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Cbx3P23198 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cbx3P23198 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cbx3P23198 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC11.46□□□□□ -0.57
Cbx3P23198 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Cbx3P23198 Gm43125-201ENSMUST00000201724 730 ntBASIC11.46□□□□□ -0.57
Cbx3P23198 Rasgrp4-212ENSMUST00000204194 2993 ntTSL 5 BASIC11.46□□□□□ -0.57
Cbx3P23198 Gm45453-201ENSMUST00000211758 853 ntBASIC11.46□□□□□ -0.57
Cbx3P23198 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cbx3P23198 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Cbx3P23198 Gm44942-201ENSMUST00000096093 2072 ntBASIC11.46□□□□□ -0.57
Cbx3P23198 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cbx3P23198 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cbx3P23198 Gm45089-201ENSMUST00000208082 2040 ntBASIC11.46□□□□□ -0.57
Cbx3P23198 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cbx3P23198 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC11.46□□□□□ -0.58
Cbx3P23198 Olfr1121-202ENSMUST00000213792 1996 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Cbx3P23198 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cbx3P23198 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC11.46□□□□□ -0.58
Cbx3P23198 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms