Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
BdnfP21237 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
BdnfP21237 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
BdnfP21237 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
BdnfP21237 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
BdnfP21237 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
BdnfP21237 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
BdnfP21237 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.12□□□□□ -0.47
BdnfP21237 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
BdnfP21237 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC12.12□□□□□ -0.47
BdnfP21237 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.12□□□□□ -0.47
BdnfP21237 Gm18916-201ENSMUST00000198264 1246 ntBASIC12.12□□□□□ -0.47
BdnfP21237 Gm44069-201ENSMUST00000204898 506 ntBASIC12.12□□□□□ -0.47
BdnfP21237 Gm6458-201ENSMUST00000211573 635 ntBASIC12.12□□□□□ -0.47
BdnfP21237 AC155252.1-201ENSMUST00000226462 1208 ntBASIC12.12□□□□□ -0.47
BdnfP21237 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
BdnfP21237 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
BdnfP21237 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
BdnfP21237 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
BdnfP21237 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
BdnfP21237 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
BdnfP21237 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
BdnfP21237 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
BdnfP21237 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
BdnfP21237 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
BdnfP21237 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC12.12□□□□□ -0.47
BdnfP21237 Gm5053-201ENSMUST00000208361 1678 ntBASIC12.12□□□□□ -0.47
BdnfP21237 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
BdnfP21237 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
BdnfP21237 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
BdnfP21237 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
BdnfP21237 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
BdnfP21237 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
BdnfP21237 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
BdnfP21237 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC12.11□□□□□ -0.47
BdnfP21237 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
BdnfP21237 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
BdnfP21237 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
BdnfP21237 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
BdnfP21237 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
BdnfP21237 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
BdnfP21237 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
BdnfP21237 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
BdnfP21237 Muc13-201ENSMUST00000023520 2942 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
BdnfP21237 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
BdnfP21237 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
BdnfP21237 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
BdnfP21237 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
BdnfP21237 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
BdnfP21237 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
BdnfP21237 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
BdnfP21237 Efcab12-201ENSMUST00000032468 2551 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
BdnfP21237 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.11□□□□□ -0.47
BdnfP21237 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
BdnfP21237 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.11□□□□□ -0.47
BdnfP21237 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
BdnfP21237 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
BdnfP21237 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
BdnfP21237 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
BdnfP21237 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.11□□□□□ -0.47
BdnfP21237 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC12.11□□□□□ -0.47
BdnfP21237 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
BdnfP21237 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
BdnfP21237 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
BdnfP21237 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
BdnfP21237 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
BdnfP21237 AC156031.2-201ENSMUST00000213107 3310 ntBASIC12.11□□□□□ -0.47
BdnfP21237 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
BdnfP21237 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.11□□□□□ -0.47
BdnfP21237 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
BdnfP21237 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
BdnfP21237 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
BdnfP21237 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
BdnfP21237 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
BdnfP21237 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
BdnfP21237 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
BdnfP21237 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
BdnfP21237 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
BdnfP21237 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
BdnfP21237 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
BdnfP21237 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
BdnfP21237 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
BdnfP21237 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
BdnfP21237 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
BdnfP21237 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.1□□□□□ -0.47
BdnfP21237 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
BdnfP21237 AL645783.1-201ENSMUST00000221416 1832 ntBASIC12.1□□□□□ -0.47
BdnfP21237 Esr2-202ENSMUST00000101291 3362 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
BdnfP21237 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
BdnfP21237 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
BdnfP21237 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC12.1□□□□□ -0.47
BdnfP21237 Gm12091-201ENSMUST00000146791 830 ntBASIC12.1□□□□□ -0.47
BdnfP21237 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
BdnfP21237 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
BdnfP21237 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC12.1□□□□□ -0.47
BdnfP21237 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
BdnfP21237 Gm18473-201ENSMUST00000220543 868 ntBASIC12.1□□□□□ -0.47
BdnfP21237 AC162801.1-201ENSMUST00000220612 198 ntBASIC12.1□□□□□ -0.47
BdnfP21237 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
BdnfP21237 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms