Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 AC137842.1-201ENSMUST00000227896 2064 ntBASIC11.1□□□□□ -0.63
Ccl3P10855 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ccl3P10855 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ccl3P10855 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ccl3P10855 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC11.1□□□□□ -0.63
Ccl3P10855 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ccl3P10855 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ccl3P10855 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC11.1□□□□□ -0.63
Ccl3P10855 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ccl3P10855 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC11.1□□□□□ -0.63
Ccl3P10855 Gm24934-201ENSMUST00000103764 111 ntBASIC11.1□□□□□ -0.63
Ccl3P10855 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ccl3P10855 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC11.1□□□□□ -0.63
Ccl3P10855 Gm13035-201ENSMUST00000117496 342 ntBASIC11.1□□□□□ -0.63
Ccl3P10855 Gm13045-201ENSMUST00000119019 712 ntBASIC11.1□□□□□ -0.63
Ccl3P10855 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC11.1□□□□□ -0.63
Ccl3P10855 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ccl3P10855 Gm9022-201ENSMUST00000182482 992 ntBASIC11.1□□□□□ -0.63
Ccl3P10855 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC11.1□□□□□ -0.63
Ccl3P10855 Gm18038-201ENSMUST00000197900 485 ntBASIC11.1□□□□□ -0.63
Ccl3P10855 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ccl3P10855 Gm43962-201ENSMUST00000203898 190 ntBASIC11.1□□□□□ -0.63
Ccl3P10855 Gm44126-201ENSMUST00000204831 514 ntBASIC11.1□□□□□ -0.63
Ccl3P10855 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ccl3P10855 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC11.1□□□□□ -0.63
Ccl3P10855 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ccl3P10855 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ccl3P10855 AC154305.4-201ENSMUST00000224520 614 ntBASIC11.1□□□□□ -0.63
Ccl3P10855 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Ccl3P10855 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC11.1□□□□□ -0.63
Ccl3P10855 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ccl3P10855 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ccl3P10855 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ccl3P10855 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ccl3P10855 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC11.1□□□□□ -0.63
Ccl3P10855 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Ccl3P10855 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ccl3P10855 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Ccl3P10855 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Ccl3P10855 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ccl3P10855 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ccl3P10855 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Ccl3P10855 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Ccl3P10855 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ccl3P10855 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ccl3P10855 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ccl3P10855 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ccl3P10855 Gm5525-201ENSMUST00000190438 1312 ntBASIC11.09□□□□□ -0.63
Ccl3P10855 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ccl3P10855 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Ccl3P10855 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ccl3P10855 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ccl3P10855 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ccl3P10855 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ccl3P10855 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Ccl3P10855 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ccl3P10855 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ccl3P10855 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ccl3P10855 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC11.09□□□□□ -0.63
Ccl3P10855 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ccl3P10855 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ccl3P10855 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ccl3P10855 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ccl3P10855 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Ccl3P10855 Gm45342-201ENSMUST00000210903 1363 ntBASIC11.09□□□□□ -0.63
Ccl3P10855 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ccl3P10855 Gm22133-201ENSMUST00000102082 109 ntBASIC11.09□□□□□ -0.63
Ccl3P10855 Gm12165-201ENSMUST00000117047 342 ntBASIC11.09□□□□□ -0.63
Ccl3P10855 Gm15131-201ENSMUST00000119124 595 ntBASIC11.09□□□□□ -0.63
Ccl3P10855 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC11.09□□□□□ -0.63
Ccl3P10855 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC11.09□□□□□ -0.63
Ccl3P10855 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC11.09□□□□□ -0.63
Ccl3P10855 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC11.09□□□□□ -0.63
Ccl3P10855 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC11.09□□□□□ -0.63
Ccl3P10855 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC11.09□□□□□ -0.63
Ccl3P10855 Gm17827-201ENSMUST00000211825 742 ntBASIC11.09□□□□□ -0.63
Ccl3P10855 D9Wsu149-201ENSMUST00000214169 594 ntBASIC11.09□□□□□ -0.63
Ccl3P10855 AC125486.1-201ENSMUST00000218701 320 ntBASIC11.09□□□□□ -0.63
Ccl3P10855 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ccl3P10855 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ccl3P10855 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ccl3P10855 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ccl3P10855 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ccl3P10855 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ccl3P10855 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ccl3P10855 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC11.09□□□□□ -0.63
Ccl3P10855 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ccl3P10855 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ccl3P10855 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ccl3P10855 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Ccl3P10855 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ccl3P10855 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Ccl3P10855 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC11.09□□□□□ -0.63
Ccl3P10855 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ccl3P10855 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ccl3P10855 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
Ccl3P10855 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Ccl3P10855 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
Ccl3P10855 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
Ccl3P10855 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC11.08□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms