Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp6P0C0A3 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp6P0C0A3 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Chmp6P0C0A3 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp6P0C0A3 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC13.75□□□□□ -0.21
Chmp6P0C0A3 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC13.75□□□□□ -0.21
Chmp6P0C0A3 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp6P0C0A3 Gm45880-201ENSMUST00000213041 853 ntBASIC13.75□□□□□ -0.21
Chmp6P0C0A3 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC13.75□□□□□ -0.21
Chmp6P0C0A3 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC13.75□□□□□ -0.21
Chmp6P0C0A3 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp6P0C0A3 AC022775.2-201ENSMUST00000227885 646 ntBASIC13.75□□□□□ -0.21
Chmp6P0C0A3 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp6P0C0A3 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp6P0C0A3 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp6P0C0A3 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC13.75□□□□□ -0.21
Chmp6P0C0A3 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp6P0C0A3 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp6P0C0A3 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp6P0C0A3 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp6P0C0A3 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp6P0C0A3 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp6P0C0A3 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp6P0C0A3 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp6P0C0A3 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp6P0C0A3 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp6P0C0A3 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chmp6P0C0A3 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chmp6P0C0A3 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC13.74□□□□□ -0.21
Chmp6P0C0A3 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chmp6P0C0A3 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chmp6P0C0A3 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Chmp6P0C0A3 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chmp6P0C0A3 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Chmp6P0C0A3 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Chmp6P0C0A3 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chmp6P0C0A3 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
Chmp6P0C0A3 Gm9200-201ENSMUST00000118513 1354 ntBASIC13.74□□□□□ -0.21
Chmp6P0C0A3 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chmp6P0C0A3 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Chmp6P0C0A3 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chmp6P0C0A3 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chmp6P0C0A3 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chmp6P0C0A3 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chmp6P0C0A3 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
Chmp6P0C0A3 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chmp6P0C0A3 AC151895.1-201ENSMUST00000219025 1742 ntBASIC13.74□□□□□ -0.21
Chmp6P0C0A3 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Chmp6P0C0A3 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC13.74□□□□□ -0.21
Chmp6P0C0A3 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chmp6P0C0A3 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Chmp6P0C0A3 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC13.74□□□□□ -0.21
Chmp6P0C0A3 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Chmp6P0C0A3 AC166051.1-201ENSMUST00000214313 210 ntBASIC13.74□□□□□ -0.21
Chmp6P0C0A3 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Chmp6P0C0A3 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Chmp6P0C0A3 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Chmp6P0C0A3 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chmp6P0C0A3 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chmp6P0C0A3 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chmp6P0C0A3 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC13.74□□□□□ -0.21
Chmp6P0C0A3 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chmp6P0C0A3 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chmp6P0C0A3 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chmp6P0C0A3 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Chmp6P0C0A3 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chmp6P0C0A3 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chmp6P0C0A3 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chmp6P0C0A3 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Chmp6P0C0A3 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Chmp6P0C0A3 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Chmp6P0C0A3 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Chmp6P0C0A3 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Chmp6P0C0A3 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Chmp6P0C0A3 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Chmp6P0C0A3 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Chmp6P0C0A3 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Chmp6P0C0A3 Gm44851-201ENSMUST00000205735 2309 ntBASIC13.73□□□□□ -0.21
Chmp6P0C0A3 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Chmp6P0C0A3 Gm43579-201ENSMUST00000202387 1307 ntBASIC13.73□□□□□ -0.21
Chmp6P0C0A3 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Chmp6P0C0A3 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Chmp6P0C0A3 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Chmp6P0C0A3 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Chmp6P0C0A3 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Chmp6P0C0A3 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Chmp6P0C0A3 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Chmp6P0C0A3 Gm5187-201ENSMUST00000117317 991 ntBASIC13.73□□□□□ -0.21
Chmp6P0C0A3 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC13.73□□□□□ -0.21
Chmp6P0C0A3 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Chmp6P0C0A3 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC13.73□□□□□ -0.21
Chmp6P0C0A3 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC13.73□□□□□ -0.21
Chmp6P0C0A3 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC13.73□□□□□ -0.21
Chmp6P0C0A3 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Chmp6P0C0A3 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC13.73□□□□□ -0.21
Chmp6P0C0A3 Gm27514-201ENSMUST00000183692 110 ntBASIC13.73□□□□□ -0.21
Chmp6P0C0A3 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Chmp6P0C0A3 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC13.73□□□□□ -0.21
Chmp6P0C0A3 Gm4935-201ENSMUST00000221316 1198 ntBASIC13.73□□□□□ -0.21
Chmp6P0C0A3 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms