Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
NclP09405 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
NclP09405 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
NclP09405 AC113441.2-201ENSMUST00000221538 1468 ntBASIC18.71■□□□□ 0.59
NclP09405 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.58
NclP09405 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
NclP09405 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
NclP09405 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
NclP09405 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NclP09405 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
NclP09405 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
NclP09405 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
NclP09405 Gm15703-201ENSMUST00000120250 880 ntBASIC18.7■□□□□ 0.58
NclP09405 Gm13570-201ENSMUST00000140763 309 ntBASIC18.7■□□□□ 0.58
NclP09405 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NclP09405 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC18.7■□□□□ 0.58
NclP09405 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
NclP09405 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
NclP09405 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NclP09405 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC18.7■□□□□ 0.58
NclP09405 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NclP09405 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NclP09405 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NclP09405 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
NclP09405 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NclP09405 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NclP09405 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NclP09405 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NclP09405 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
NclP09405 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NclP09405 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
NclP09405 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NclP09405 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NclP09405 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NclP09405 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NclP09405 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC18.69■□□□□ 0.58
NclP09405 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
NclP09405 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NclP09405 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NclP09405 Gm18212-201ENSMUST00000211678 889 ntBASIC18.69■□□□□ 0.58
NclP09405 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NclP09405 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NclP09405 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NclP09405 Gm10076-201ENSMUST00000073238 384 ntBASIC18.69■□□□□ 0.58
NclP09405 Gm10312-201ENSMUST00000078515 489 ntBASIC18.69■□□□□ 0.58
NclP09405 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NclP09405 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NclP09405 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NclP09405 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NclP09405 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
NclP09405 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
NclP09405 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
NclP09405 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
NclP09405 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NclP09405 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NclP09405 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NclP09405 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
NclP09405 AC126444.1-201ENSMUST00000225938 1768 ntBASIC18.68■□□□□ 0.58
NclP09405 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC18.68■□□□□ 0.58
NclP09405 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NclP09405 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NclP09405 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NclP09405 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC18.68■□□□□ 0.58
NclP09405 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NclP09405 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NclP09405 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NclP09405 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
NclP09405 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
NclP09405 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NclP09405 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NclP09405 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NclP09405 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NclP09405 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
NclP09405 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
NclP09405 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
NclP09405 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC18.67■□□□□ 0.58
NclP09405 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
NclP09405 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NclP09405 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NclP09405 Gm12314-201ENSMUST00000118104 538 ntBASIC18.67■□□□□ 0.58
NclP09405 Gm11597-201ENSMUST00000121423 964 ntBASIC18.67■□□□□ 0.58
NclP09405 Gm26361-201ENSMUST00000158868 186 ntBASIC18.67■□□□□ 0.58
NclP09405 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
NclP09405 AC125209.1-201ENSMUST00000225812 766 ntBASIC18.67■□□□□ 0.58
NclP09405 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC18.67■□□□□ 0.58
NclP09405 Mettl6-204ENSMUST00000227595 1027 ntBASIC18.67■□□□□ 0.58
NclP09405 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NclP09405 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
NclP09405 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
NclP09405 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
NclP09405 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
NclP09405 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NclP09405 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NclP09405 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NclP09405 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
NclP09405 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NclP09405 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NclP09405 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC18.67■□□□□ 0.58
NclP09405 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
NclP09405 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms