Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TnfP06804 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TnfP06804 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC13.37□□□□□ -0.27
TnfP06804 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TnfP06804 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TnfP06804 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TnfP06804 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
TnfP06804 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TnfP06804 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TnfP06804 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TnfP06804 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TnfP06804 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
TnfP06804 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TnfP06804 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TnfP06804 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TnfP06804 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC13.36□□□□□ -0.27
TnfP06804 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TnfP06804 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TnfP06804 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TnfP06804 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TnfP06804 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TnfP06804 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TnfP06804 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TnfP06804 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC13.36□□□□□ -0.27
TnfP06804 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TnfP06804 Gm14130-201ENSMUST00000118417 987 ntBASIC13.36□□□□□ -0.27
TnfP06804 Gm13665-201ENSMUST00000120830 528 ntBASIC13.36□□□□□ -0.27
TnfP06804 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC13.36□□□□□ -0.27
TnfP06804 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TnfP06804 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC13.36□□□□□ -0.27
TnfP06804 Gm25700-201ENSMUST00000177693 110 ntBASIC13.36□□□□□ -0.27
TnfP06804 Gm8494-201ENSMUST00000178171 1233 ntBASIC13.36□□□□□ -0.27
TnfP06804 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TnfP06804 Gm18304-201ENSMUST00000189162 546 ntBASIC13.36□□□□□ -0.27
TnfP06804 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TnfP06804 Gm45186-201ENSMUST00000206874 478 ntBASIC13.36□□□□□ -0.27
TnfP06804 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC13.36□□□□□ -0.27
TnfP06804 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC13.36□□□□□ -0.27
TnfP06804 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TnfP06804 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TnfP06804 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TnfP06804 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TnfP06804 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
TnfP06804 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TnfP06804 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TnfP06804 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TnfP06804 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TnfP06804 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TnfP06804 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TnfP06804 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TnfP06804 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TnfP06804 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TnfP06804 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC13.36□□□□□ -0.27
TnfP06804 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TnfP06804 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TnfP06804 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TnfP06804 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TnfP06804 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TnfP06804 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TnfP06804 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TnfP06804 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
TnfP06804 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TnfP06804 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
TnfP06804 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
TnfP06804 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TnfP06804 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TnfP06804 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TnfP06804 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
TnfP06804 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
TnfP06804 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TnfP06804 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TnfP06804 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC13.35□□□□□ -0.27
TnfP06804 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
TnfP06804 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TnfP06804 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
TnfP06804 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TnfP06804 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC13.35□□□□□ -0.27
TnfP06804 Gm4760-201ENSMUST00000119663 1030 ntBASIC13.35□□□□□ -0.27
TnfP06804 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TnfP06804 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TnfP06804 Gm26361-201ENSMUST00000158868 186 ntBASIC13.35□□□□□ -0.27
TnfP06804 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC13.35□□□□□ -0.27
TnfP06804 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC13.35□□□□□ -0.27
TnfP06804 Gm5070-201ENSMUST00000177599 862 ntBASIC13.35□□□□□ -0.27
TnfP06804 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TnfP06804 Gm37466-201ENSMUST00000195692 652 ntBASIC13.35□□□□□ -0.27
TnfP06804 Gm42937-201ENSMUST00000197360 752 ntBASIC13.35□□□□□ -0.27
TnfP06804 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC13.35□□□□□ -0.27
TnfP06804 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TnfP06804 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC13.35□□□□□ -0.27
TnfP06804 Gzmn-202ENSMUST00000225535 989 ntBASIC13.35□□□□□ -0.27
TnfP06804 AC123665.1-201ENSMUST00000228204 438 ntBASIC13.35□□□□□ -0.27
TnfP06804 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TnfP06804 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TnfP06804 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
TnfP06804 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TnfP06804 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TnfP06804 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TnfP06804 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TnfP06804 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms