Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
P06344 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
P06344 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC11.26□□□□□ -0.61
P06344 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
P06344 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC11.26□□□□□ -0.61
P06344 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
P06344 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
P06344 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
P06344 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
P06344 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
P06344 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
P06344 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
P06344 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
P06344 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
P06344 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
P06344 Gm43677-201ENSMUST00000198098 2378 ntBASIC11.25□□□□□ -0.61
P06344 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
P06344 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
P06344 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
P06344 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC11.25□□□□□ -0.61
P06344 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
P06344 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
P06344 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
P06344 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
P06344 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC11.25□□□□□ -0.61
P06344 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
P06344 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
P06344 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
P06344 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
P06344 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
P06344 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
P06344 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
P06344 Gm7584-201ENSMUST00000175829 940 ntBASIC11.25□□□□□ -0.61
P06344 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
P06344 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC11.25□□□□□ -0.61
P06344 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC11.25□□□□□ -0.61
P06344 Gm38341-201ENSMUST00000195357 515 ntBASIC11.25□□□□□ -0.61
P06344 Gm7783-201ENSMUST00000204795 781 ntBASIC11.25□□□□□ -0.61
P06344 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC11.25□□□□□ -0.61
P06344 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
P06344 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
P06344 AC165260.3-202ENSMUST00000224550 1031 ntBASIC11.25□□□□□ -0.61
P06344 AC154171.1-201ENSMUST00000224610 643 ntBASIC11.25□□□□□ -0.61
P06344 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
P06344 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
P06344 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
P06344 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
P06344 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
P06344 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
P06344 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
P06344 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
P06344 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
P06344 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
P06344 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
P06344 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
P06344 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
P06344 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC11.25□□□□□ -0.61
P06344 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
P06344 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
P06344 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
P06344 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
P06344 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
P06344 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
P06344 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
P06344 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
P06344 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
P06344 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC11.25□□□□□ -0.61
P06344 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
P06344 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
P06344 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
P06344 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
P06344 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
P06344 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
P06344 Gm43045-201ENSMUST00000198725 2095 ntBASIC11.24□□□□□ -0.61
P06344 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
P06344 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC11.24□□□□□ -0.61
P06344 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC11.24□□□□□ -0.61
P06344 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
P06344 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
P06344 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
P06344 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
P06344 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
P06344 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
P06344 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
P06344 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
P06344 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC11.24□□□□□ -0.61
P06344 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
P06344 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
P06344 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
P06344 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
P06344 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
P06344 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
P06344 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC11.24□□□□□ -0.61
P06344 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
P06344 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
P06344 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC11.24□□□□□ -0.61
P06344 Gm13350-201ENSMUST00000120519 479 ntBASIC11.24□□□□□ -0.61
P06344 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
P06344 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
P06344 Gm16296-201ENSMUST00000159905 325 ntBASIC11.24□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms