Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC10.89□□□□□ -0.67
Igh-VJ558P01758 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Igh-VJ558P01758 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Igh-VJ558P01758 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Igh-VJ558P01758 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Igh-VJ558P01758 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC10.88□□□□□ -0.67
Igh-VJ558P01758 Gm45743-201ENSMUST00000212701 2795 ntBASIC10.88□□□□□ -0.67
Igh-VJ558P01758 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Igh-VJ558P01758 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC10.88□□□□□ -0.67
Igh-VJ558P01758 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Igh-VJ558P01758 Gm5884-201ENSMUST00000036712 1479 ntBASIC10.88□□□□□ -0.67
Igh-VJ558P01758 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Igh-VJ558P01758 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Igh-VJ558P01758 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC10.88□□□□□ -0.67
Igh-VJ558P01758 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Igh-VJ558P01758 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Igh-VJ558P01758 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Igh-VJ558P01758 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Igh-VJ558P01758 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Igh-VJ558P01758 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC10.88□□□□□ -0.67
Igh-VJ558P01758 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Igh-VJ558P01758 Gm16379-201ENSMUST00000161469 348 ntBASIC10.88□□□□□ -0.67
Igh-VJ558P01758 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Igh-VJ558P01758 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Igh-VJ558P01758 Gm7063-201ENSMUST00000186840 981 ntBASIC10.88□□□□□ -0.67
Igh-VJ558P01758 Gm45784-201ENSMUST00000188360 142 ntBASIC10.88□□□□□ -0.67
Igh-VJ558P01758 Gm8762-201ENSMUST00000193486 339 ntBASIC10.88□□□□□ -0.67
Igh-VJ558P01758 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC10.88□□□□□ -0.67
Igh-VJ558P01758 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC10.88□□□□□ -0.67
Igh-VJ558P01758 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Igh-VJ558P01758 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Igh-VJ558P01758 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Igh-VJ558P01758 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Igh-VJ558P01758 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Igh-VJ558P01758 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Igh-VJ558P01758 Zfp125-201ENSMUST00000079237 2488 ntBASIC10.88□□□□□ -0.67
Igh-VJ558P01758 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Igh-VJ558P01758 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Igh-VJ558P01758 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Igh-VJ558P01758 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Igh-VJ558P01758 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Igh-VJ558P01758 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Igh-VJ558P01758 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Igh-VJ558P01758 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Igh-VJ558P01758 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Igh-VJ558P01758 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Igh-VJ558P01758 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Igh-VJ558P01758 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Igh-VJ558P01758 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Igh-VJ558P01758 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Igh-VJ558P01758 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC10.87□□□□□ -0.67
Igh-VJ558P01758 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Igh-VJ558P01758 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Igh-VJ558P01758 AC155298.2-201ENSMUST00000225485 6226 ntBASIC10.87□□□□□ -0.67
Igh-VJ558P01758 Gm8038-201ENSMUST00000164674 2044 ntBASIC10.87□□□□□ -0.67
Igh-VJ558P01758 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Igh-VJ558P01758 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Igh-VJ558P01758 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC10.87□□□□□ -0.67
Igh-VJ558P01758 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Igh-VJ558P01758 Gm7049-201ENSMUST00000223520 1712 ntBASIC10.87□□□□□ -0.67
Igh-VJ558P01758 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Igh-VJ558P01758 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Igh-VJ558P01758 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC10.87□□□□□ -0.67
Igh-VJ558P01758 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Igh-VJ558P01758 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC10.87□□□□□ -0.67
Igh-VJ558P01758 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Igh-VJ558P01758 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Igh-VJ558P01758 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Igh-VJ558P01758 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Igh-VJ558P01758 Gm23119-201ENSMUST00000158610 140 ntBASIC10.87□□□□□ -0.67
Igh-VJ558P01758 Gm24548-201ENSMUST00000158650 108 ntBASIC10.87□□□□□ -0.67
Igh-VJ558P01758 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Igh-VJ558P01758 Gm18304-201ENSMUST00000189162 546 ntBASIC10.87□□□□□ -0.67
Igh-VJ558P01758 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
Igh-VJ558P01758 Gm44405-201ENSMUST00000198952 126 ntBASIC10.87□□□□□ -0.67
Igh-VJ558P01758 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Igh-VJ558P01758 Gm5781-201ENSMUST00000219792 443 ntBASIC10.87□□□□□ -0.67
Igh-VJ558P01758 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC10.87□□□□□ -0.67
Igh-VJ558P01758 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Igh-VJ558P01758 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Igh-VJ558P01758 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Igh-VJ558P01758 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Igh-VJ558P01758 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Igh-VJ558P01758 Gm42748-201ENSMUST00000199354 2341 ntBASIC10.87□□□□□ -0.67
Igh-VJ558P01758 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Igh-VJ558P01758 Dctn4-202ENSMUST00000223590 1530 ntBASIC10.87□□□□□ -0.67
Igh-VJ558P01758 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Igh-VJ558P01758 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC10.87□□□□□ -0.67
Igh-VJ558P01758 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Igh-VJ558P01758 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Igh-VJ558P01758 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Igh-VJ558P01758 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Igh-VJ558P01758 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Igh-VJ558P01758 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Igh-VJ558P01758 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Igh-VJ558P01758 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Igh-VJ558P01758 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Igh-VJ558P01758 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Igh-VJ558P01758 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Igh-VJ558P01758 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 63.8 ms