Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vti1aO89116 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Vti1aO89116 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC13.63□□□□□ -0.23
Vti1aO89116 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Vti1aO89116 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vti1aO89116 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Vti1aO89116 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Vti1aO89116 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vti1aO89116 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Vti1aO89116 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vti1aO89116 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vti1aO89116 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vti1aO89116 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Vti1aO89116 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Vti1aO89116 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Vti1aO89116 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC13.63□□□□□ -0.23
Vti1aO89116 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vti1aO89116 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC13.63□□□□□ -0.23
Vti1aO89116 Gm37444-201ENSMUST00000193605 439 ntBASIC13.63□□□□□ -0.23
Vti1aO89116 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC13.63□□□□□ -0.23
Vti1aO89116 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vti1aO89116 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vti1aO89116 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vti1aO89116 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Vti1aO89116 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vti1aO89116 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vti1aO89116 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Vti1aO89116 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vti1aO89116 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vti1aO89116 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
Vti1aO89116 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vti1aO89116 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Vti1aO89116 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vti1aO89116 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vti1aO89116 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vti1aO89116 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vti1aO89116 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Vti1aO89116 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Vti1aO89116 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vti1aO89116 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC13.62□□□□□ -0.23
Vti1aO89116 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vti1aO89116 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vti1aO89116 Gm10305-201ENSMUST00000195331 2475 ntBASIC13.62□□□□□ -0.23
Vti1aO89116 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC13.62□□□□□ -0.23
Vti1aO89116 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC13.62□□□□□ -0.23
Vti1aO89116 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC13.62□□□□□ -0.23
Vti1aO89116 Gm2546-201ENSMUST00000182630 991 ntBASIC13.62□□□□□ -0.23
Vti1aO89116 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC13.62□□□□□ -0.23
Vti1aO89116 Gm9678-201ENSMUST00000198979 1149 ntBASIC13.62□□□□□ -0.23
Vti1aO89116 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC13.62□□□□□ -0.23
Vti1aO89116 Rps4l-202ENSMUST00000204242 789 ntBASIC13.62□□□□□ -0.23
Vti1aO89116 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC13.62□□□□□ -0.23
Vti1aO89116 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC13.62□□□□□ -0.23
Vti1aO89116 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC13.62□□□□□ -0.23
Vti1aO89116 Gm18615-201ENSMUST00000222919 1031 ntBASIC13.62□□□□□ -0.23
Vti1aO89116 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vti1aO89116 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vti1aO89116 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC13.62□□□□□ -0.23
Vti1aO89116 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Vti1aO89116 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vti1aO89116 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vti1aO89116 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vti1aO89116 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Vti1aO89116 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vti1aO89116 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vti1aO89116 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Vti1aO89116 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vti1aO89116 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Vti1aO89116 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vti1aO89116 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vti1aO89116 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vti1aO89116 Ntrk2-208ENSMUST00000225583 2719 ntBASIC13.62□□□□□ -0.23
Vti1aO89116 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vti1aO89116 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Vti1aO89116 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vti1aO89116 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC13.61□□□□□ -0.23
Vti1aO89116 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Vti1aO89116 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vti1aO89116 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vti1aO89116 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Vti1aO89116 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Vti1aO89116 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vti1aO89116 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Vti1aO89116 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
Vti1aO89116 Gm12012-201ENSMUST00000118857 1066 ntBASIC13.61□□□□□ -0.23
Vti1aO89116 Gm14704-201ENSMUST00000120300 874 ntBASIC13.61□□□□□ -0.23
Vti1aO89116 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC13.61□□□□□ -0.23
Vti1aO89116 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Vti1aO89116 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC13.61□□□□□ -0.23
Vti1aO89116 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vti1aO89116 Gm16505-201ENSMUST00000179981 232 ntBASIC13.61□□□□□ -0.23
Vti1aO89116 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Vti1aO89116 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC13.61□□□□□ -0.23
Vti1aO89116 Gm3786-201ENSMUST00000202659 378 ntBASIC13.61□□□□□ -0.23
Vti1aO89116 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC13.61□□□□□ -0.23
Vti1aO89116 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vti1aO89116 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC13.61□□□□□ -0.23
Vti1aO89116 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Vti1aO89116 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vti1aO89116 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms