Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Cops4O88544 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Cops4O88544 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Cops4O88544 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Cops4O88544 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC11.64□□□□□ -0.55
Cops4O88544 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cops4O88544 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cops4O88544 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Cops4O88544 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cops4O88544 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cops4O88544 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cops4O88544 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Cops4O88544 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cops4O88544 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cops4O88544 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC11.64□□□□□ -0.55
Cops4O88544 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cops4O88544 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cops4O88544 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cops4O88544 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cops4O88544 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Cops4O88544 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cops4O88544 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC11.64□□□□□ -0.55
Cops4O88544 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
Cops4O88544 Gm12416-201ENSMUST00000120911 1008 ntBASIC11.64□□□□□ -0.55
Cops4O88544 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cops4O88544 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC11.64□□□□□ -0.55
Cops4O88544 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC11.64□□□□□ -0.55
Cops4O88544 Gm16215-201ENSMUST00000161990 637 ntBASIC11.64□□□□□ -0.55
Cops4O88544 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cops4O88544 Gm5354-201ENSMUST00000182417 973 ntBASIC11.64□□□□□ -0.55
Cops4O88544 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC11.64□□□□□ -0.55
Cops4O88544 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC11.64□□□□□ -0.55
Cops4O88544 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cops4O88544 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cops4O88544 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cops4O88544 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cops4O88544 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC11.64□□□□□ -0.55
Cops4O88544 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Cops4O88544 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cops4O88544 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cops4O88544 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cops4O88544 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cops4O88544 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cops4O88544 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cops4O88544 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cops4O88544 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cops4O88544 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cops4O88544 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cops4O88544 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cops4O88544 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cops4O88544 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Cops4O88544 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cops4O88544 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC11.63□□□□□ -0.55
Cops4O88544 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cops4O88544 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cops4O88544 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cops4O88544 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC11.63□□□□□ -0.55
Cops4O88544 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cops4O88544 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cops4O88544 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cops4O88544 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cops4O88544 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cops4O88544 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC11.63□□□□□ -0.55
Cops4O88544 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cops4O88544 Gm25927-201ENSMUST00000175058 117 ntBASIC11.63□□□□□ -0.55
Cops4O88544 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC11.63□□□□□ -0.55
Cops4O88544 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cops4O88544 Gm42550-201ENSMUST00000201553 960 ntBASIC11.63□□□□□ -0.55
Cops4O88544 Gm20949-201ENSMUST00000206478 952 ntBASIC11.63□□□□□ -0.55
Cops4O88544 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC11.63□□□□□ -0.55
Cops4O88544 AC073947.2-201ENSMUST00000215888 1130 ntBASIC11.63□□□□□ -0.55
Cops4O88544 AC124732.1-201ENSMUST00000221551 910 ntBASIC11.63□□□□□ -0.55
Cops4O88544 Wdyhv1-203ENSMUST00000226889 394 ntBASIC11.63□□□□□ -0.55
Cops4O88544 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cops4O88544 Gm26035-201ENSMUST00000083065 308 ntBASIC11.63□□□□□ -0.55
Cops4O88544 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cops4O88544 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC11.63□□□□□ -0.55
Cops4O88544 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Cops4O88544 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC11.63□□□□□ -0.55
Cops4O88544 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cops4O88544 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cops4O88544 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cops4O88544 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cops4O88544 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cops4O88544 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cops4O88544 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Cops4O88544 Ldb3-207ENSMUST00000227819 1499 ntBASIC11.63□□□□□ -0.55
Cops4O88544 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cops4O88544 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Cops4O88544 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC11.63□□□□□ -0.55
Cops4O88544 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cops4O88544 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC11.62□□□□□ -0.55
Cops4O88544 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cops4O88544 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cops4O88544 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Cops4O88544 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cops4O88544 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cops4O88544 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC11.62□□□□□ -0.55
Cops4O88544 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Cops4O88544 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms