Protein–RNA interactions for Protein: O70401

Tspan6, Tetraspanin-6, mousemouse

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tspan6O70401 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tspan6O70401 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tspan6O70401 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tspan6O70401 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tspan6O70401 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Tspan6O70401 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tspan6O70401 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Tspan6O70401 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.31□□□□□ -0.44
Tspan6O70401 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC12.31□□□□□ -0.44
Tspan6O70401 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Tspan6O70401 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tspan6O70401 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tspan6O70401 Gm32999-201ENSMUST00000192693 562 ntBASIC12.31□□□□□ -0.44
Tspan6O70401 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
Tspan6O70401 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tspan6O70401 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tspan6O70401 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tspan6O70401 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Tspan6O70401 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Tspan6O70401 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Tspan6O70401 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tspan6O70401 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC12.31□□□□□ -0.44
Tspan6O70401 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Tspan6O70401 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Tspan6O70401 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tspan6O70401 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tspan6O70401 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tspan6O70401 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC12.31□□□□□ -0.44
Tspan6O70401 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Tspan6O70401 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tspan6O70401 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tspan6O70401 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tspan6O70401 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Tspan6O70401 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Tspan6O70401 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Tspan6O70401 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tspan6O70401 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tspan6O70401 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tspan6O70401 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tspan6O70401 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tspan6O70401 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tspan6O70401 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tspan6O70401 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tspan6O70401 Gm12217-201ENSMUST00000118858 696 ntBASIC12.3□□□□□ -0.44
Tspan6O70401 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC12.3□□□□□ -0.44
Tspan6O70401 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC12.3□□□□□ -0.44
Tspan6O70401 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Tspan6O70401 Gm8494-201ENSMUST00000178171 1233 ntBASIC12.3□□□□□ -0.44
Tspan6O70401 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tspan6O70401 Gm19187-201ENSMUST00000206781 892 ntBASIC12.3□□□□□ -0.44
Tspan6O70401 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tspan6O70401 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tspan6O70401 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tspan6O70401 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tspan6O70401 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Tspan6O70401 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tspan6O70401 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Tspan6O70401 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tspan6O70401 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Tspan6O70401 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.3□□□□□ -0.44
Tspan6O70401 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tspan6O70401 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tspan6O70401 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Tspan6O70401 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tspan6O70401 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tspan6O70401 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tspan6O70401 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tspan6O70401 Gm15271-201ENSMUST00000134627 2110 ntTSL 5 BASIC12.29□□□□□ -0.44
Tspan6O70401 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Tspan6O70401 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Tspan6O70401 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Tspan6O70401 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tspan6O70401 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tspan6O70401 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tspan6O70401 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tspan6O70401 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tspan6O70401 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tspan6O70401 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Tspan6O70401 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC12.29□□□□□ -0.44
Tspan6O70401 Gm14208-201ENSMUST00000119645 678 ntBASIC12.29□□□□□ -0.44
Tspan6O70401 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tspan6O70401 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Tspan6O70401 Mir5120-201ENSMUST00000175020 78 ntBASIC12.29□□□□□ -0.44
Tspan6O70401 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Tspan6O70401 Mir6927-201ENSMUST00000184494 71 ntBASIC12.29□□□□□ -0.44
Tspan6O70401 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC12.29□□□□□ -0.44
Tspan6O70401 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC12.29□□□□□ -0.44
Tspan6O70401 Gm8913-201ENSMUST00000209491 641 ntBASIC12.29□□□□□ -0.44
Tspan6O70401 Gm45598-202ENSMUST00000210719 986 ntBASIC12.29□□□□□ -0.44
Tspan6O70401 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Tspan6O70401 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Tspan6O70401 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tspan6O70401 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tspan6O70401 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tspan6O70401 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tspan6O70401 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tspan6O70401 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC12.29□□□□□ -0.44
Tspan6O70401 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tspan6O70401 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Tspan6O70401 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms