Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC12.5□□□□□ -0.41
Pdlim1O70400 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pdlim1O70400 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pdlim1O70400 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pdlim1O70400 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pdlim1O70400 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.5□□□□□ -0.41
Pdlim1O70400 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pdlim1O70400 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pdlim1O70400 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pdlim1O70400 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pdlim1O70400 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pdlim1O70400 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.5□□□□□ -0.41
Pdlim1O70400 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Pdlim1O70400 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pdlim1O70400 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pdlim1O70400 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pdlim1O70400 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pdlim1O70400 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pdlim1O70400 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pdlim1O70400 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pdlim1O70400 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pdlim1O70400 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pdlim1O70400 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC12.49□□□□□ -0.41
Pdlim1O70400 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pdlim1O70400 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pdlim1O70400 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pdlim1O70400 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pdlim1O70400 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pdlim1O70400 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pdlim1O70400 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pdlim1O70400 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC12.49□□□□□ -0.41
Pdlim1O70400 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC12.49□□□□□ -0.41
Pdlim1O70400 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC12.49□□□□□ -0.41
Pdlim1O70400 Gm29396-201ENSMUST00000185659 716 ntBASIC12.49□□□□□ -0.41
Pdlim1O70400 Gm38114-201ENSMUST00000191877 1232 ntBASIC12.49□□□□□ -0.41
Pdlim1O70400 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pdlim1O70400 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC12.49□□□□□ -0.41
Pdlim1O70400 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pdlim1O70400 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Pdlim1O70400 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pdlim1O70400 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
Pdlim1O70400 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pdlim1O70400 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pdlim1O70400 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pdlim1O70400 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Pdlim1O70400 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pdlim1O70400 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pdlim1O70400 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pdlim1O70400 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Pdlim1O70400 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pdlim1O70400 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Pdlim1O70400 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pdlim1O70400 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pdlim1O70400 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pdlim1O70400 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pdlim1O70400 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pdlim1O70400 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pdlim1O70400 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.48□□□□□ -0.41
Pdlim1O70400 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pdlim1O70400 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pdlim1O70400 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pdlim1O70400 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pdlim1O70400 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pdlim1O70400 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pdlim1O70400 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pdlim1O70400 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pdlim1O70400 Gm24231-201ENSMUST00000104315 133 ntBASIC12.48□□□□□ -0.41
Pdlim1O70400 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Pdlim1O70400 Gm5940-201ENSMUST00000117582 1068 ntBASIC12.48□□□□□ -0.41
Pdlim1O70400 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.48□□□□□ -0.41
Pdlim1O70400 Gm14760-201ENSMUST00000121831 999 ntBASIC12.48□□□□□ -0.41
Pdlim1O70400 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC12.48□□□□□ -0.41
Pdlim1O70400 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC12.48□□□□□ -0.41
Pdlim1O70400 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pdlim1O70400 Olfr284-202ENSMUST00000206647 966 ntBASIC12.48□□□□□ -0.41
Pdlim1O70400 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC12.48□□□□□ -0.41
Pdlim1O70400 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC12.48□□□□□ -0.41
Pdlim1O70400 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.48□□□□□ -0.41
Pdlim1O70400 Gm7399-201ENSMUST00000032395 858 ntBASIC12.48□□□□□ -0.41
Pdlim1O70400 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pdlim1O70400 Gm9823-201ENSMUST00000051212 327 ntBASIC12.48□□□□□ -0.41
Pdlim1O70400 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pdlim1O70400 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pdlim1O70400 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Pdlim1O70400 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pdlim1O70400 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC12.48□□□□□ -0.41
Pdlim1O70400 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pdlim1O70400 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pdlim1O70400 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Pdlim1O70400 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pdlim1O70400 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pdlim1O70400 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pdlim1O70400 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
Pdlim1O70400 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pdlim1O70400 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pdlim1O70400 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pdlim1O70400 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Pdlim1O70400 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pdlim1O70400 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.47□□□□□ -0.41
Pdlim1O70400 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms