Protein–RNA interactions for Protein: O70174

Chrna4, Neuronal acetylcholine receptor subunit alpha-4, mousemouse

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna4O70174 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Chrna4O70174 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chrna4O70174 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chrna4O70174 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chrna4O70174 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Chrna4O70174 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chrna4O70174 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chrna4O70174 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chrna4O70174 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chrna4O70174 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chrna4O70174 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chrna4O70174 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chrna4O70174 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chrna4O70174 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chrna4O70174 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Chrna4O70174 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Chrna4O70174 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Chrna4O70174 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chrna4O70174 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chrna4O70174 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chrna4O70174 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chrna4O70174 Gm5187-201ENSMUST00000117317 991 ntBASIC12.71□□□□□ -0.37
Chrna4O70174 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Chrna4O70174 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC12.71□□□□□ -0.37
Chrna4O70174 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC12.71□□□□□ -0.37
Chrna4O70174 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Chrna4O70174 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chrna4O70174 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chrna4O70174 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC12.71□□□□□ -0.37
Chrna4O70174 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC12.71□□□□□ -0.37
Chrna4O70174 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC12.71□□□□□ -0.37
Chrna4O70174 Gm9728-201ENSMUST00000200197 1055 ntBASIC12.71□□□□□ -0.37
Chrna4O70174 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC12.71□□□□□ -0.37
Chrna4O70174 Gm10371-202ENSMUST00000228010 1081 ntBASIC12.71□□□□□ -0.37
Chrna4O70174 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC12.71□□□□□ -0.37
Chrna4O70174 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Chrna4O70174 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chrna4O70174 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Chrna4O70174 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chrna4O70174 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chrna4O70174 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Chrna4O70174 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Chrna4O70174 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.71□□□□□ -0.38
Chrna4O70174 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Chrna4O70174 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Chrna4O70174 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.71□□□□□ -0.38
Chrna4O70174 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Chrna4O70174 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Chrna4O70174 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Chrna4O70174 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.71□□□□□ -0.38
Chrna4O70174 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Chrna4O70174 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Chrna4O70174 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Chrna4O70174 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chrna4O70174 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chrna4O70174 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Chrna4O70174 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chrna4O70174 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chrna4O70174 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chrna4O70174 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chrna4O70174 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Chrna4O70174 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chrna4O70174 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Chrna4O70174 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chrna4O70174 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Chrna4O70174 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Chrna4O70174 Gm24231-201ENSMUST00000104315 133 ntBASIC12.7□□□□□ -0.38
Chrna4O70174 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC12.7□□□□□ -0.38
Chrna4O70174 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC12.7□□□□□ -0.38
Chrna4O70174 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC12.7□□□□□ -0.38
Chrna4O70174 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC12.7□□□□□ -0.38
Chrna4O70174 Gm5850-201ENSMUST00000192923 1206 ntBASIC12.7□□□□□ -0.38
Chrna4O70174 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC12.7□□□□□ -0.38
Chrna4O70174 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.7□□□□□ -0.38
Chrna4O70174 Gm5904-201ENSMUST00000210286 865 ntBASIC12.7□□□□□ -0.38
Chrna4O70174 Gm17823-201ENSMUST00000217830 1006 ntBASIC12.7□□□□□ -0.38
Chrna4O70174 Gm5781-201ENSMUST00000219792 443 ntBASIC12.7□□□□□ -0.38
Chrna4O70174 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Chrna4O70174 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chrna4O70174 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chrna4O70174 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Chrna4O70174 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Chrna4O70174 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Chrna4O70174 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Chrna4O70174 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chrna4O70174 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.7□□□□□ -0.38
Chrna4O70174 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Chrna4O70174 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Chrna4O70174 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chrna4O70174 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.7□□□□□ -0.38
Chrna4O70174 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.7□□□□□ -0.38
Chrna4O70174 Gm7789-202ENSMUST00000211273 1400 ntBASIC12.7□□□□□ -0.38
Chrna4O70174 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Chrna4O70174 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chrna4O70174 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Chrna4O70174 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC12.69□□□□□ -0.38
Chrna4O70174 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC12.69□□□□□ -0.38
Chrna4O70174 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chrna4O70174 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.69□□□□□ -0.38
Chrna4O70174 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms