Protein–RNA interactions for Protein: O54890

Itgb3, Integrin beta-3, mousemouse

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itgb3O54890 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Itgb3O54890 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC13.36□□□□□ -0.27
Itgb3O54890 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Itgb3O54890 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Itgb3O54890 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC13.36□□□□□ -0.27
Itgb3O54890 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Itgb3O54890 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Itgb3O54890 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC13.36□□□□□ -0.27
Itgb3O54890 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Itgb3O54890 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Itgb3O54890 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Itgb3O54890 CT009713.10-202ENSMUST00000225734 696 ntBASIC13.36□□□□□ -0.27
Itgb3O54890 AC113031.8-201ENSMUST00000227856 631 ntBASIC13.36□□□□□ -0.27
Itgb3O54890 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Itgb3O54890 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Itgb3O54890 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Itgb3O54890 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Itgb3O54890 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Itgb3O54890 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Itgb3O54890 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Itgb3O54890 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC13.36□□□□□ -0.27
Itgb3O54890 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Itgb3O54890 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC13.36□□□□□ -0.27
Itgb3O54890 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Itgb3O54890 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC13.36□□□□□ -0.27
Itgb3O54890 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Itgb3O54890 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Itgb3O54890 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC13.36□□□□□ -0.27
Itgb3O54890 Gm8862-201ENSMUST00000198379 1346 ntBASIC13.36□□□□□ -0.27
Itgb3O54890 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Itgb3O54890 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Itgb3O54890 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Itgb3O54890 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Itgb3O54890 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Itgb3O54890 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Itgb3O54890 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Itgb3O54890 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Itgb3O54890 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Itgb3O54890 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Itgb3O54890 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Itgb3O54890 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC13.35□□□□□ -0.27
Itgb3O54890 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Itgb3O54890 Gm6082-201ENSMUST00000215204 454 ntBASIC13.35□□□□□ -0.27
Itgb3O54890 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Itgb3O54890 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Itgb3O54890 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Itgb3O54890 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Itgb3O54890 Retreg1-206ENSMUST00000228306 1430 ntBASIC13.35□□□□□ -0.27
Itgb3O54890 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
Itgb3O54890 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Itgb3O54890 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Itgb3O54890 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Itgb3O54890 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Itgb3O54890 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Itgb3O54890 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Itgb3O54890 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Itgb3O54890 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Itgb3O54890 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Itgb3O54890 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Itgb3O54890 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Itgb3O54890 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Itgb3O54890 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Itgb3O54890 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Itgb3O54890 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Itgb3O54890 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Itgb3O54890 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Itgb3O54890 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Itgb3O54890 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Itgb3O54890 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Itgb3O54890 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Itgb3O54890 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Itgb3O54890 Gm6015-201ENSMUST00000217493 1586 ntBASIC13.34□□□□□ -0.27
Itgb3O54890 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Itgb3O54890 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Itgb3O54890 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Itgb3O54890 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC13.34□□□□□ -0.27
Itgb3O54890 Gm13570-201ENSMUST00000140763 309 ntBASIC13.34□□□□□ -0.27
Itgb3O54890 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Itgb3O54890 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC13.34□□□□□ -0.27
Itgb3O54890 Gm38000-201ENSMUST00000192390 1215 ntBASIC13.34□□□□□ -0.27
Itgb3O54890 Gm38241-201ENSMUST00000192641 898 ntBASIC13.34□□□□□ -0.27
Itgb3O54890 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC13.34□□□□□ -0.27
Itgb3O54890 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Itgb3O54890 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC13.34□□□□□ -0.27
Itgb3O54890 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC13.34□□□□□ -0.27
Itgb3O54890 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC13.34□□□□□ -0.27
Itgb3O54890 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Itgb3O54890 Gm10076-201ENSMUST00000073238 384 ntBASIC13.34□□□□□ -0.27
Itgb3O54890 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Itgb3O54890 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Itgb3O54890 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Itgb3O54890 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC13.34□□□□□ -0.27
Itgb3O54890 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Itgb3O54890 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Itgb3O54890 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC13.34□□□□□ -0.27
Itgb3O54890 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Itgb3O54890 Gm4864-201ENSMUST00000219894 1461 ntBASIC13.34□□□□□ -0.27
Itgb3O54890 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Itgb3O54890 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Itgb3O54890 Ssr1-203ENSMUST00000225246 1825 ntBASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms