Protein–RNA interactions for Protein: O35134

Polr1a, DNA-directed RNA polymerase I subunit RPA1, mousemouse

Known RBP Predictions only

Length 1,717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1aO35134 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Polr1aO35134 Gm45638-201ENSMUST00000211507 2878 ntBASIC19.03■□□□□ 0.64
Polr1aO35134 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Polr1aO35134 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Polr1aO35134 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Polr1aO35134 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Polr1aO35134 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Polr1aO35134 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Polr1aO35134 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Polr1aO35134 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Polr1aO35134 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC19.03■□□□□ 0.64
Polr1aO35134 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Polr1aO35134 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Polr1aO35134 Gm8737-201ENSMUST00000122208 642 ntBASIC19.03■□□□□ 0.64
Polr1aO35134 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Polr1aO35134 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC19.03■□□□□ 0.64
Polr1aO35134 CT485606.1-201ENSMUST00000213187 878 ntBASIC19.03■□□□□ 0.64
Polr1aO35134 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Polr1aO35134 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Polr1aO35134 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Polr1aO35134 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Polr1aO35134 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Polr1aO35134 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Polr1aO35134 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Polr1aO35134 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Polr1aO35134 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Polr1aO35134 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Polr1aO35134 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Polr1aO35134 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC19.02■□□□□ 0.64
Polr1aO35134 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Polr1aO35134 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC19.02■□□□□ 0.64
Polr1aO35134 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Polr1aO35134 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.64
Polr1aO35134 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC19.02■□□□□ 0.64
Polr1aO35134 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Polr1aO35134 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.63
Polr1aO35134 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC19.02■□□□□ 0.63
Polr1aO35134 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC19.02■□□□□ 0.63
Polr1aO35134 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Polr1aO35134 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC19.02■□□□□ 0.63
Polr1aO35134 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC19.02■□□□□ 0.63
Polr1aO35134 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC19.02■□□□□ 0.63
Polr1aO35134 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC19.02■□□□□ 0.63
Polr1aO35134 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Polr1aO35134 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
Polr1aO35134 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Polr1aO35134 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
Polr1aO35134 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Polr1aO35134 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Polr1aO35134 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Polr1aO35134 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Polr1aO35134 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Polr1aO35134 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Polr1aO35134 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Polr1aO35134 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC19.01■□□□□ 0.63
Polr1aO35134 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Polr1aO35134 Gm24844-201ENSMUST00000158679 127 ntBASIC19.01■□□□□ 0.63
Polr1aO35134 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC19.01■□□□□ 0.63
Polr1aO35134 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC19.01■□□□□ 0.63
Polr1aO35134 Gm2553-201ENSMUST00000215986 605 ntBASIC19.01■□□□□ 0.63
Polr1aO35134 AC124433.1-201ENSMUST00000224483 1063 ntBASIC19.01■□□□□ 0.63
Polr1aO35134 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Polr1aO35134 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
Polr1aO35134 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Polr1aO35134 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Polr1aO35134 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Polr1aO35134 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Polr1aO35134 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
Polr1aO35134 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Polr1aO35134 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Polr1aO35134 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Polr1aO35134 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Polr1aO35134 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Polr1aO35134 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC19.01■□□□□ 0.63
Polr1aO35134 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Polr1aO35134 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Polr1aO35134 Gm18198-201ENSMUST00000204986 1551 ntBASIC19■□□□□ 0.63
Polr1aO35134 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC19■□□□□ 0.63
Polr1aO35134 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC19■□□□□ 0.63
Polr1aO35134 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC19■□□□□ 0.63
Polr1aO35134 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC19■□□□□ 0.63
Polr1aO35134 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC19■□□□□ 0.63
Polr1aO35134 Gm3551-201ENSMUST00000190750 664 ntBASIC19■□□□□ 0.63
Polr1aO35134 Gm34023-201ENSMUST00000195539 217 ntBASIC19■□□□□ 0.63
Polr1aO35134 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Polr1aO35134 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC19■□□□□ 0.63
Polr1aO35134 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Polr1aO35134 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC19■□□□□ 0.63
Polr1aO35134 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Polr1aO35134 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC19■□□□□ 0.63
Polr1aO35134 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Polr1aO35134 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Polr1aO35134 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC19■□□□□ 0.63
Polr1aO35134 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Polr1aO35134 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC19■□□□□ 0.63
Polr1aO35134 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC19■□□□□ 0.63
Polr1aO35134 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
Polr1aO35134 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Polr1aO35134 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Polr1aO35134 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms