Protein–RNA interactions for Protein: O09106

Hdac1, Histone deacetylase 1, mousemouse

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac1O09106 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Hdac1O09106 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Hdac1O09106 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Hdac1O09106 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC14.97□□□□□ -0.01
Hdac1O09106 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Hdac1O09106 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Hdac1O09106 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Hdac1O09106 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Hdac1O09106 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Hdac1O09106 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Hdac1O09106 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC14.97□□□□□ -0.01
Hdac1O09106 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC14.97□□□□□ -0.01
Hdac1O09106 Gm27437-201ENSMUST00000183429 107 ntBASIC14.97□□□□□ -0.01
Hdac1O09106 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Hdac1O09106 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Hdac1O09106 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Hdac1O09106 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Hdac1O09106 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Hdac1O09106 Gm10012-201ENSMUST00000078252 192 ntBASIC14.97□□□□□ -0.01
Hdac1O09106 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Hdac1O09106 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Hdac1O09106 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Hdac1O09106 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
Hdac1O09106 Gm5422-201ENSMUST00000050717 2721 ntBASIC14.97□□□□□ -0.01
Hdac1O09106 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Hdac1O09106 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Hdac1O09106 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Hdac1O09106 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Hdac1O09106 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Hdac1O09106 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Hdac1O09106 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC14.96□□□□□ -0.01
Hdac1O09106 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Hdac1O09106 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Hdac1O09106 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
Hdac1O09106 CT025678.1-201ENSMUST00000214795 2972 ntBASIC14.96□□□□□ -0.01
Hdac1O09106 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Hdac1O09106 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Hdac1O09106 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC14.96□□□□□ -0.01
Hdac1O09106 Gm12203-201ENSMUST00000118235 598 ntBASIC14.96□□□□□ -0.01
Hdac1O09106 Gm13369-201ENSMUST00000119442 987 ntBASIC14.96□□□□□ -0.01
Hdac1O09106 Gm12209-201ENSMUST00000120089 596 ntBASIC14.96□□□□□ -0.01
Hdac1O09106 Gm11964-201ENSMUST00000120982 444 ntBASIC14.96□□□□□ -0.01
Hdac1O09106 Gm12363-201ENSMUST00000122250 668 ntBASIC14.96□□□□□ -0.01
Hdac1O09106 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Hdac1O09106 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Hdac1O09106 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Hdac1O09106 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Hdac1O09106 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC14.96□□□□□ -0.01
Hdac1O09106 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC14.96□□□□□ -0.01
Hdac1O09106 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC14.96□□□□□ -0.01
Hdac1O09106 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Hdac1O09106 AC150560.1-201ENSMUST00000227731 1187 ntBASIC14.96□□□□□ -0.01
Hdac1O09106 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Hdac1O09106 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Hdac1O09106 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Hdac1O09106 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Hdac1O09106 Gm18983-201ENSMUST00000222884 2729 ntBASIC14.96□□□□□ -0.01
Hdac1O09106 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Hdac1O09106 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC14.96□□□□□ -0.01
Hdac1O09106 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
Hdac1O09106 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Hdac1O09106 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Hdac1O09106 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Hdac1O09106 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Hdac1O09106 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Hdac1O09106 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Hdac1O09106 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Hdac1O09106 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC14.95□□□□□ -0.02
Hdac1O09106 Gm40377-201ENSMUST00000204604 2015 ntBASIC14.95□□□□□ -0.02
Hdac1O09106 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Hdac1O09106 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Hdac1O09106 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Hdac1O09106 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
Hdac1O09106 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC14.95□□□□□ -0.02
Hdac1O09106 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Hdac1O09106 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Hdac1O09106 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Hdac1O09106 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Hdac1O09106 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Hdac1O09106 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC14.95□□□□□ -0.02
Hdac1O09106 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC14.95□□□□□ -0.02
Hdac1O09106 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Hdac1O09106 AC155237.1-201ENSMUST00000226196 1279 ntBASIC14.95□□□□□ -0.02
Hdac1O09106 n-R5s77-201ENSMUST00000083757 119 ntBASIC14.95□□□□□ -0.02
Hdac1O09106 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Hdac1O09106 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Hdac1O09106 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC14.95□□□□□ -0.02
Hdac1O09106 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Hdac1O09106 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Hdac1O09106 Gm42943-201ENSMUST00000199676 3242 ntBASIC14.95□□□□□ -0.02
Hdac1O09106 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC14.95□□□□□ -0.02
Hdac1O09106 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
Hdac1O09106 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Hdac1O09106 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Hdac1O09106 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Hdac1O09106 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Hdac1O09106 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC14.95□□□□□ -0.02
Hdac1O09106 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Hdac1O09106 AC160410.1-201ENSMUST00000219298 1972 ntBASIC14.94□□□□□ -0.02
Hdac1O09106 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms