Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ebf3O08791 Gm5597-201ENSMUST00000182353 1193 ntBASIC13.13□□□□□ -0.31
Ebf3O08791 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC13.13□□□□□ -0.31
Ebf3O08791 Gm8099-201ENSMUST00000200510 742 ntBASIC13.13□□□□□ -0.31
Ebf3O08791 Gm43416-201ENSMUST00000201916 1015 ntBASIC13.13□□□□□ -0.31
Ebf3O08791 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ebf3O08791 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Ebf3O08791 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ebf3O08791 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ebf3O08791 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ebf3O08791 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ebf3O08791 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ebf3O08791 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ebf3O08791 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ebf3O08791 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ebf3O08791 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ebf3O08791 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ebf3O08791 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ebf3O08791 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Ebf3O08791 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ebf3O08791 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC13.13□□□□□ -0.31
Ebf3O08791 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ebf3O08791 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ebf3O08791 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ebf3O08791 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ebf3O08791 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ebf3O08791 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ebf3O08791 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ebf3O08791 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC13.12□□□□□ -0.31
Ebf3O08791 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ebf3O08791 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ebf3O08791 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ebf3O08791 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ebf3O08791 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Ebf3O08791 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ebf3O08791 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ebf3O08791 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ebf3O08791 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Ebf3O08791 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ebf3O08791 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ebf3O08791 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ebf3O08791 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ebf3O08791 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC13.12□□□□□ -0.31
Ebf3O08791 Gm13875-201ENSMUST00000120162 282 ntBASIC13.12□□□□□ -0.31
Ebf3O08791 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC13.12□□□□□ -0.31
Ebf3O08791 Gm2260-201ENSMUST00000184965 657 ntBASIC13.12□□□□□ -0.31
Ebf3O08791 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC13.12□□□□□ -0.31
Ebf3O08791 Gm38317-201ENSMUST00000195564 343 ntBASIC13.12□□□□□ -0.31
Ebf3O08791 Ighv8-10-201ENSMUST00000199579 358 ntBASIC13.12□□□□□ -0.31
Ebf3O08791 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC13.12□□□□□ -0.31
Ebf3O08791 Gm13097-201ENSMUST00000210722 397 ntBASIC13.12□□□□□ -0.31
Ebf3O08791 Gm9004-201ENSMUST00000218739 1222 ntBASIC13.12□□□□□ -0.31
Ebf3O08791 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC13.12□□□□□ -0.31
Ebf3O08791 AC126253.1-202ENSMUST00000226732 835 ntBASIC13.12□□□□□ -0.31
Ebf3O08791 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ebf3O08791 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ebf3O08791 Gm22058-201ENSMUST00000083393 310 ntBASIC13.12□□□□□ -0.31
Ebf3O08791 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ebf3O08791 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ebf3O08791 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ebf3O08791 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ebf3O08791 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ebf3O08791 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ebf3O08791 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ebf3O08791 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ebf3O08791 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ebf3O08791 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Ebf3O08791 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ebf3O08791 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Ebf3O08791 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ebf3O08791 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Ebf3O08791 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ebf3O08791 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Ebf3O08791 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.11□□□□□ -0.31
Ebf3O08791 Daam2-202ENSMUST00000224595 1926 ntBASIC13.11□□□□□ -0.31
Ebf3O08791 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ebf3O08791 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ebf3O08791 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Ebf3O08791 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ebf3O08791 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC13.11□□□□□ -0.31
Ebf3O08791 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ebf3O08791 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Ebf3O08791 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ebf3O08791 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ebf3O08791 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ebf3O08791 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC13.11□□□□□ -0.31
Ebf3O08791 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC13.11□□□□□ -0.31
Ebf3O08791 Gm15276-201ENSMUST00000145953 498 ntBASIC13.11□□□□□ -0.31
Ebf3O08791 Mir3547-201ENSMUST00000175461 88 ntBASIC13.11□□□□□ -0.31
Ebf3O08791 Gm27341-201ENSMUST00000183570 106 ntBASIC13.11□□□□□ -0.31
Ebf3O08791 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ebf3O08791 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ebf3O08791 Gm43138-201ENSMUST00000199123 708 ntBASIC13.11□□□□□ -0.31
Ebf3O08791 Gm44772-201ENSMUST00000207623 1191 ntBASIC13.11□□□□□ -0.31
Ebf3O08791 Gm18212-201ENSMUST00000211678 889 ntBASIC13.11□□□□□ -0.31
Ebf3O08791 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC13.11□□□□□ -0.31
Ebf3O08791 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC13.11□□□□□ -0.31
Ebf3O08791 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC13.11□□□□□ -0.31
Ebf3O08791 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ebf3O08791 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 65.5 ms