Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfrsf11bO08712 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfrsf11bO08712 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfrsf11bO08712 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfrsf11bO08712 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfrsf11bO08712 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfrsf11bO08712 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfrsf11bO08712 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.8□□□□□ -0.36
Tnfrsf11bO08712 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfrsf11bO08712 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfrsf11bO08712 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfrsf11bO08712 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfrsf11bO08712 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfrsf11bO08712 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfrsf11bO08712 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfrsf11bO08712 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Tnfrsf11bO08712 Gm12490-201ENSMUST00000120255 560 ntBASIC12.79□□□□□ -0.36
Tnfrsf11bO08712 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.79□□□□□ -0.36
Tnfrsf11bO08712 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfrsf11bO08712 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC12.79□□□□□ -0.36
Tnfrsf11bO08712 Gm7029-201ENSMUST00000173226 450 ntBASIC12.79□□□□□ -0.36
Tnfrsf11bO08712 Gm38092-201ENSMUST00000195600 653 ntBASIC12.79□□□□□ -0.36
Tnfrsf11bO08712 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfrsf11bO08712 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfrsf11bO08712 Gm24526-201ENSMUST00000082921 158 ntBASIC12.79□□□□□ -0.36
Tnfrsf11bO08712 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfrsf11bO08712 Daam2-202ENSMUST00000224595 1926 ntBASIC12.79□□□□□ -0.36
Tnfrsf11bO08712 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Tnfrsf11bO08712 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfrsf11bO08712 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.79□□□□□ -0.36
Tnfrsf11bO08712 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfrsf11bO08712 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfrsf11bO08712 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfrsf11bO08712 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfrsf11bO08712 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfrsf11bO08712 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfrsf11bO08712 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfrsf11bO08712 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf11bO08712 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.78□□□□□ -0.36
Tnfrsf11bO08712 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.78□□□□□ -0.36
Tnfrsf11bO08712 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC12.78□□□□□ -0.36
Tnfrsf11bO08712 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf11bO08712 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf11bO08712 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf11bO08712 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
Tnfrsf11bO08712 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.78□□□□□ -0.36
Tnfrsf11bO08712 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.78□□□□□ -0.36
Tnfrsf11bO08712 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf11bO08712 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Tnfrsf11bO08712 Gm24231-201ENSMUST00000104315 133 ntBASIC12.78□□□□□ -0.36
Tnfrsf11bO08712 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC12.78□□□□□ -0.36
Tnfrsf11bO08712 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf11bO08712 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf11bO08712 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC12.78□□□□□ -0.36
Tnfrsf11bO08712 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC12.78□□□□□ -0.36
Tnfrsf11bO08712 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC12.78□□□□□ -0.36
Tnfrsf11bO08712 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf11bO08712 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf11bO08712 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf11bO08712 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf11bO08712 Gm27839-201ENSMUST00000184242 106 ntBASIC12.78□□□□□ -0.36
Tnfrsf11bO08712 Gm42442-201ENSMUST00000197951 1133 ntBASIC12.78□□□□□ -0.36
Tnfrsf11bO08712 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf11bO08712 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
Tnfrsf11bO08712 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf11bO08712 Gm6091-201ENSMUST00000098307 165 ntBASIC12.78□□□□□ -0.36
Tnfrsf11bO08712 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Tnfrsf11bO08712 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.78□□□□□ -0.36
Tnfrsf11bO08712 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Tnfrsf11bO08712 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC12.78□□□□□ -0.36
Tnfrsf11bO08712 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Tnfrsf11bO08712 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf11bO08712 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf11bO08712 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf11bO08712 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.78□□□□□ -0.36
Tnfrsf11bO08712 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf11bO08712 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Tnfrsf11bO08712 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf11bO08712 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf11bO08712 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf11bO08712 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Tnfrsf11bO08712 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Tnfrsf11bO08712 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf11bO08712 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Tnfrsf11bO08712 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Tnfrsf11bO08712 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Tnfrsf11bO08712 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Tnfrsf11bO08712 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Tnfrsf11bO08712 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Tnfrsf11bO08712 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Tnfrsf11bO08712 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Tnfrsf11bO08712 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Tnfrsf11bO08712 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Tnfrsf11bO08712 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfrsf11bO08712 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfrsf11bO08712 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Tnfrsf11bO08712 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Tnfrsf11bO08712 Gm12384-201ENSMUST00000119228 919 ntBASIC12.77□□□□□ -0.37
Tnfrsf11bO08712 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC12.77□□□□□ -0.37
Tnfrsf11bO08712 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms