Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Shisa8J3QNX5 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Shisa8J3QNX5 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Shisa8J3QNX5 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Shisa8J3QNX5 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Shisa8J3QNX5 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Shisa8J3QNX5 Gm37171-201ENSMUST00000192636 1185 ntBASIC11.49□□□□□ -0.57
Shisa8J3QNX5 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC11.49□□□□□ -0.57
Shisa8J3QNX5 Gm42929-201ENSMUST00000198374 1286 ntBASIC11.49□□□□□ -0.57
Shisa8J3QNX5 Gm44069-201ENSMUST00000204898 506 ntBASIC11.49□□□□□ -0.57
Shisa8J3QNX5 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC11.49□□□□□ -0.57
Shisa8J3QNX5 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC11.49□□□□□ -0.57
Shisa8J3QNX5 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC11.49□□□□□ -0.57
Shisa8J3QNX5 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC11.49□□□□□ -0.57
Shisa8J3QNX5 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC11.49□□□□□ -0.57
Shisa8J3QNX5 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Shisa8J3QNX5 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Shisa8J3QNX5 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Shisa8J3QNX5 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Shisa8J3QNX5 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Shisa8J3QNX5 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Shisa8J3QNX5 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Shisa8J3QNX5 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Shisa8J3QNX5 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Shisa8J3QNX5 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Shisa8J3QNX5 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Shisa8J3QNX5 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Shisa8J3QNX5 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Shisa8J3QNX5 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Shisa8J3QNX5 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Shisa8J3QNX5 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Shisa8J3QNX5 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Shisa8J3QNX5 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Shisa8J3QNX5 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Shisa8J3QNX5 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Shisa8J3QNX5 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Shisa8J3QNX5 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Shisa8J3QNX5 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC11.48□□□□□ -0.57
Shisa8J3QNX5 Gm22189-201ENSMUST00000103822 86 ntBASIC11.48□□□□□ -0.57
Shisa8J3QNX5 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC11.48□□□□□ -0.57
Shisa8J3QNX5 Gm15321-201ENSMUST00000121290 288 ntBASIC11.48□□□□□ -0.57
Shisa8J3QNX5 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Shisa8J3QNX5 Gm27838-201ENSMUST00000184829 128 ntBASIC11.48□□□□□ -0.57
Shisa8J3QNX5 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC11.48□□□□□ -0.57
Shisa8J3QNX5 Gm19184-201ENSMUST00000196798 928 ntBASIC11.48□□□□□ -0.57
Shisa8J3QNX5 Gm42612-201ENSMUST00000197986 623 ntBASIC11.48□□□□□ -0.57
Shisa8J3QNX5 Gm43170-201ENSMUST00000199827 612 ntBASIC11.48□□□□□ -0.57
Shisa8J3QNX5 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Shisa8J3QNX5 AC132863.2-201ENSMUST00000226643 799 ntBASIC11.48□□□□□ -0.57
Shisa8J3QNX5 Hist1h2al-201ENSMUST00000091708 339 ntBASIC11.48□□□□□ -0.57
Shisa8J3QNX5 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Shisa8J3QNX5 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Shisa8J3QNX5 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Shisa8J3QNX5 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
Shisa8J3QNX5 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Shisa8J3QNX5 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Shisa8J3QNX5 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Shisa8J3QNX5 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Shisa8J3QNX5 CT009713.10-201ENSMUST00000225013 1986 ntBASIC11.48□□□□□ -0.57
Shisa8J3QNX5 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Shisa8J3QNX5 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Shisa8J3QNX5 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Shisa8J3QNX5 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Shisa8J3QNX5 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Shisa8J3QNX5 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Shisa8J3QNX5 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Shisa8J3QNX5 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Shisa8J3QNX5 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Shisa8J3QNX5 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC11.48□□□□□ -0.57
Shisa8J3QNX5 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Shisa8J3QNX5 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Shisa8J3QNX5 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Shisa8J3QNX5 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC11.47□□□□□ -0.57
Shisa8J3QNX5 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Shisa8J3QNX5 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Shisa8J3QNX5 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Shisa8J3QNX5 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC11.47□□□□□ -0.57
Shisa8J3QNX5 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC11.47□□□□□ -0.57
Shisa8J3QNX5 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Shisa8J3QNX5 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
Shisa8J3QNX5 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Shisa8J3QNX5 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Shisa8J3QNX5 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Shisa8J3QNX5 Cog3-203ENSMUST00000227473 4197 ntBASIC11.47□□□□□ -0.57
Shisa8J3QNX5 AC101945.2-201ENSMUST00000227886 1377 ntBASIC11.47□□□□□ -0.57
Shisa8J3QNX5 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Shisa8J3QNX5 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Shisa8J3QNX5 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Shisa8J3QNX5 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Shisa8J3QNX5 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC11.47□□□□□ -0.57
Shisa8J3QNX5 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Shisa8J3QNX5 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC11.47□□□□□ -0.57
Shisa8J3QNX5 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC11.47□□□□□ -0.57
Shisa8J3QNX5 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Shisa8J3QNX5 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC11.47□□□□□ -0.57
Shisa8J3QNX5 Gm9630-201ENSMUST00000178304 885 ntBASIC11.47□□□□□ -0.57
Shisa8J3QNX5 Gm45195-201ENSMUST00000205597 1008 ntBASIC11.47□□□□□ -0.57
Shisa8J3QNX5 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC11.47□□□□□ -0.57
Shisa8J3QNX5 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC11.47□□□□□ -0.57
Shisa8J3QNX5 AC173210.1-201ENSMUST00000222341 1131 ntBASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms