Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Trim55G3X8Y1 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trim55G3X8Y1 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Trim55G3X8Y1 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim55G3X8Y1 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim55G3X8Y1 Gm26660-202ENSMUST00000223620 4112 ntBASIC12.93□□□□□ -0.34
Trim55G3X8Y1 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Trim55G3X8Y1 AC126257.2-201ENSMUST00000215507 2300 ntBASIC12.93□□□□□ -0.34
Trim55G3X8Y1 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trim55G3X8Y1 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trim55G3X8Y1 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim55G3X8Y1 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC12.93□□□□□ -0.34
Trim55G3X8Y1 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC12.93□□□□□ -0.34
Trim55G3X8Y1 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trim55G3X8Y1 Gm27494-201ENSMUST00000184735 189 ntBASIC12.93□□□□□ -0.34
Trim55G3X8Y1 Ighv1-51-201ENSMUST00000192903 354 ntBASIC12.93□□□□□ -0.34
Trim55G3X8Y1 Gm35960-201ENSMUST00000202712 767 ntBASIC12.93□□□□□ -0.34
Trim55G3X8Y1 Gm4971-201ENSMUST00000205991 1108 ntBASIC12.93□□□□□ -0.34
Trim55G3X8Y1 Gm45841-201ENSMUST00000207700 164 ntBASIC12.93□□□□□ -0.34
Trim55G3X8Y1 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC12.93□□□□□ -0.34
Trim55G3X8Y1 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trim55G3X8Y1 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trim55G3X8Y1 Ttll7-205ENSMUST00000170055 6075 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Trim55G3X8Y1 Gm37422-201ENSMUST00000193794 4718 ntBASIC12.93□□□□□ -0.34
Trim55G3X8Y1 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim55G3X8Y1 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim55G3X8Y1 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC12.93□□□□□ -0.34
Trim55G3X8Y1 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim55G3X8Y1 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim55G3X8Y1 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Trim55G3X8Y1 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim55G3X8Y1 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trim55G3X8Y1 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Trim55G3X8Y1 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trim55G3X8Y1 Olfr1490-202ENSMUST00000213900 5165 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Trim55G3X8Y1 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC12.92□□□□□ -0.34
Trim55G3X8Y1 Gm38140-201ENSMUST00000193617 2755 ntBASIC12.92□□□□□ -0.34
Trim55G3X8Y1 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim55G3X8Y1 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim55G3X8Y1 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim55G3X8Y1 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim55G3X8Y1 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim55G3X8Y1 Cep350-204ENSMUST00000138762 13307 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Trim55G3X8Y1 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trim55G3X8Y1 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trim55G3X8Y1 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim55G3X8Y1 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Trim55G3X8Y1 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim55G3X8Y1 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Trim55G3X8Y1 Gm44831-201ENSMUST00000208469 2989 ntBASIC12.92□□□□□ -0.34
Trim55G3X8Y1 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim55G3X8Y1 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
Trim55G3X8Y1 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim55G3X8Y1 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim55G3X8Y1 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Trim55G3X8Y1 Gm11434-201ENSMUST00000122379 629 ntBASIC12.92□□□□□ -0.34
Trim55G3X8Y1 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC12.92□□□□□ -0.34
Trim55G3X8Y1 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC12.92□□□□□ -0.34
Trim55G3X8Y1 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Trim55G3X8Y1 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trim55G3X8Y1 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Trim55G3X8Y1 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim55G3X8Y1 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC12.92□□□□□ -0.34
Trim55G3X8Y1 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trim55G3X8Y1 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC12.92□□□□□ -0.34
Trim55G3X8Y1 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trim55G3X8Y1 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC12.92□□□□□ -0.34
Trim55G3X8Y1 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim55G3X8Y1 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim55G3X8Y1 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim55G3X8Y1 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim55G3X8Y1 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim55G3X8Y1 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim55G3X8Y1 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Trim55G3X8Y1 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim55G3X8Y1 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim55G3X8Y1 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim55G3X8Y1 Scrn1-201ENSMUST00000019268 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim55G3X8Y1 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Trim55G3X8Y1 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim55G3X8Y1 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trim55G3X8Y1 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC12.92□□□□□ -0.34
Trim55G3X8Y1 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim55G3X8Y1 Gm7642-201ENSMUST00000216345 1809 ntBASIC12.92□□□□□ -0.34
Trim55G3X8Y1 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trim55G3X8Y1 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Trim55G3X8Y1 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim55G3X8Y1 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC12.92□□□□□ -0.34
Trim55G3X8Y1 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim55G3X8Y1 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim55G3X8Y1 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim55G3X8Y1 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim55G3X8Y1 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim55G3X8Y1 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trim55G3X8Y1 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim55G3X8Y1 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim55G3X8Y1 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim55G3X8Y1 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trim55G3X8Y1 Gm45677-201ENSMUST00000209975 1341 ntBASIC12.91□□□□□ -0.34
Trim55G3X8Y1 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms