Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh9F8VPK8 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh9F8VPK8 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh9F8VPK8 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh9F8VPK8 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh9F8VPK8 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh9F8VPK8 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh9F8VPK8 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh9F8VPK8 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh9F8VPK8 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh9F8VPK8 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC12.92□□□□□ -0.34
Pcdh9F8VPK8 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC12.92□□□□□ -0.34
Pcdh9F8VPK8 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh9F8VPK8 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.92□□□□□ -0.34
Pcdh9F8VPK8 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh9F8VPK8 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh9F8VPK8 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh9F8VPK8 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh9F8VPK8 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh9F8VPK8 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh9F8VPK8 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.92□□□□□ -0.34
Pcdh9F8VPK8 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC12.92□□□□□ -0.34
Pcdh9F8VPK8 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
Pcdh9F8VPK8 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh9F8VPK8 Gm27331-201ENSMUST00000183705 60 ntBASIC12.92□□□□□ -0.34
Pcdh9F8VPK8 Gm27839-201ENSMUST00000184242 106 ntBASIC12.92□□□□□ -0.34
Pcdh9F8VPK8 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh9F8VPK8 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC12.92□□□□□ -0.34
Pcdh9F8VPK8 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.92□□□□□ -0.34
Pcdh9F8VPK8 Gm32025-201ENSMUST00000217960 307 ntBASIC12.92□□□□□ -0.34
Pcdh9F8VPK8 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh9F8VPK8 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh9F8VPK8 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh9F8VPK8 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Pcdh9F8VPK8 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh9F8VPK8 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh9F8VPK8 Mypopos-202ENSMUST00000205975 2321 ntBASIC12.91□□□□□ -0.34
Pcdh9F8VPK8 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh9F8VPK8 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Pcdh9F8VPK8 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
Pcdh9F8VPK8 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh9F8VPK8 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh9F8VPK8 Gm12384-201ENSMUST00000119228 919 ntBASIC12.91□□□□□ -0.34
Pcdh9F8VPK8 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.91□□□□□ -0.34
Pcdh9F8VPK8 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC12.91□□□□□ -0.34
Pcdh9F8VPK8 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh9F8VPK8 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh9F8VPK8 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.91□□□□□ -0.34
Pcdh9F8VPK8 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.91□□□□□ -0.34
Pcdh9F8VPK8 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC12.91□□□□□ -0.34
Pcdh9F8VPK8 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Pcdh9F8VPK8 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Pcdh9F8VPK8 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh9F8VPK8 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh9F8VPK8 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh9F8VPK8 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh9F8VPK8 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh9F8VPK8 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh9F8VPK8 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh9F8VPK8 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh9F8VPK8 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh9F8VPK8 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh9F8VPK8 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh9F8VPK8 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh9F8VPK8 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.91□□□□□ -0.34
Pcdh9F8VPK8 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh9F8VPK8 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh9F8VPK8 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh9F8VPK8 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh9F8VPK8 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh9F8VPK8 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh9F8VPK8 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh9F8VPK8 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Pcdh9F8VPK8 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh9F8VPK8 Gm13050-201ENSMUST00000122149 1345 ntBASIC12.9□□□□□ -0.34
Pcdh9F8VPK8 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh9F8VPK8 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh9F8VPK8 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh9F8VPK8 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh9F8VPK8 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh9F8VPK8 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Pcdh9F8VPK8 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh9F8VPK8 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh9F8VPK8 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh9F8VPK8 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh9F8VPK8 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.9□□□□□ -0.34
Pcdh9F8VPK8 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh9F8VPK8 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Pcdh9F8VPK8 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh9F8VPK8 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC12.9□□□□□ -0.34
Pcdh9F8VPK8 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Pcdh9F8VPK8 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh9F8VPK8 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh9F8VPK8 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.9□□□□□ -0.34
Pcdh9F8VPK8 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh9F8VPK8 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh9F8VPK8 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.9□□□□□ -0.34
Pcdh9F8VPK8 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC12.9□□□□□ -0.34
Pcdh9F8VPK8 Gm4768-201ENSMUST00000206199 686 ntBASIC12.9□□□□□ -0.34
Pcdh9F8VPK8 Gm44799-201ENSMUST00000207639 1202 ntBASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms