Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb9E9Q5G2 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC14.8□□□□□ -0.04
Pcdhb9E9Q5G2 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb9E9Q5G2 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb9E9Q5G2 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC14.8□□□□□ -0.04
Pcdhb9E9Q5G2 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb9E9Q5G2 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb9E9Q5G2 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Pcdhb9E9Q5G2 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb9E9Q5G2 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Pcdhb9E9Q5G2 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC14.8□□□□□ -0.04
Pcdhb9E9Q5G2 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb9E9Q5G2 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Pcdhb9E9Q5G2 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb9E9Q5G2 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb9E9Q5G2 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Pcdhb9E9Q5G2 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb9E9Q5G2 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb9E9Q5G2 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
Pcdhb9E9Q5G2 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb9E9Q5G2 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb9E9Q5G2 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb9E9Q5G2 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb9E9Q5G2 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC14.79□□□□□ -0.04
Pcdhb9E9Q5G2 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb9E9Q5G2 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb9E9Q5G2 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Pcdhb9E9Q5G2 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
Pcdhb9E9Q5G2 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb9E9Q5G2 Gm25668-201ENSMUST00000157700 129 ntBASIC14.79□□□□□ -0.04
Pcdhb9E9Q5G2 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC14.79□□□□□ -0.04
Pcdhb9E9Q5G2 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb9E9Q5G2 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb9E9Q5G2 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Pcdhb9E9Q5G2 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Pcdhb9E9Q5G2 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC14.79□□□□□ -0.04
Pcdhb9E9Q5G2 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb9E9Q5G2 Gm3096-201ENSMUST00000185770 364 ntBASIC14.79□□□□□ -0.04
Pcdhb9E9Q5G2 Gm38241-201ENSMUST00000192641 898 ntBASIC14.79□□□□□ -0.04
Pcdhb9E9Q5G2 Gm45342-201ENSMUST00000210903 1363 ntBASIC14.79□□□□□ -0.04
Pcdhb9E9Q5G2 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Pcdhb9E9Q5G2 Gm6082-201ENSMUST00000215204 454 ntBASIC14.79□□□□□ -0.04
Pcdhb9E9Q5G2 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Pcdhb9E9Q5G2 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC14.79□□□□□ -0.04
Pcdhb9E9Q5G2 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb9E9Q5G2 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb9E9Q5G2 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb9E9Q5G2 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb9E9Q5G2 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb9E9Q5G2 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb9E9Q5G2 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb9E9Q5G2 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb9E9Q5G2 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb9E9Q5G2 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb9E9Q5G2 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb9E9Q5G2 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pcdhb9E9Q5G2 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb9E9Q5G2 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb9E9Q5G2 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Pcdhb9E9Q5G2 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb9E9Q5G2 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb9E9Q5G2 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb9E9Q5G2 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb9E9Q5G2 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb9E9Q5G2 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb9E9Q5G2 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb9E9Q5G2 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb9E9Q5G2 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb9E9Q5G2 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb9E9Q5G2 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb9E9Q5G2 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb9E9Q5G2 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb9E9Q5G2 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb9E9Q5G2 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Pcdhb9E9Q5G2 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb9E9Q5G2 Gm9083-201ENSMUST00000120423 819 ntBASIC14.78□□□□□ -0.04
Pcdhb9E9Q5G2 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC14.78□□□□□ -0.04
Pcdhb9E9Q5G2 Gm18615-201ENSMUST00000222919 1031 ntBASIC14.78□□□□□ -0.04
Pcdhb9E9Q5G2 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb9E9Q5G2 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb9E9Q5G2 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb9E9Q5G2 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC14.78□□□□□ -0.04
Pcdhb9E9Q5G2 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb9E9Q5G2 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdhb9E9Q5G2 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC14.78□□□□□ -0.04
Pcdhb9E9Q5G2 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
Pcdhb9E9Q5G2 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhb9E9Q5G2 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhb9E9Q5G2 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Pcdhb9E9Q5G2 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhb9E9Q5G2 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhb9E9Q5G2 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC14.77□□□□□ -0.04
Pcdhb9E9Q5G2 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhb9E9Q5G2 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhb9E9Q5G2 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhb9E9Q5G2 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhb9E9Q5G2 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhb9E9Q5G2 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC14.77□□□□□ -0.04
Pcdhb9E9Q5G2 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhb9E9Q5G2 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms