Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 AC124772.3-201ENSMUST00000222535 575 ntBASIC6.81□□□□□ -1.32
Herc1E9PZP8 AC129217.1-201ENSMUST00000225181 642 ntBASIC6.81□□□□□ -1.32
Herc1E9PZP8 Teddm3-201ENSMUST00000170665 1346 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Herc1E9PZP8 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Herc1E9PZP8 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Herc1E9PZP8 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Herc1E9PZP8 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
Herc1E9PZP8 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Herc1E9PZP8 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
Herc1E9PZP8 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Herc1E9PZP8 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Herc1E9PZP8 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Herc1E9PZP8 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC6.81□□□□□ -1.32
Herc1E9PZP8 Ccndbp1-202ENSMUST00000099488 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Herc1E9PZP8 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
Herc1E9PZP8 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Herc1E9PZP8 Ifitm1-202ENSMUST00000106040 560 ntAPPRIS P1 TSL 3 BASIC6.81□□□□□ -1.32
Herc1E9PZP8 Ifitm1-203ENSMUST00000106042 882 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Herc1E9PZP8 Pbdc1-202ENSMUST00000119477 1239 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Herc1E9PZP8 Gm7150-201ENSMUST00000122032 981 ntBASIC6.81□□□□□ -1.32
Herc1E9PZP8 Gm6471-202ENSMUST00000148734 587 ntTSL 2 BASIC6.81□□□□□ -1.32
Herc1E9PZP8 Gm2663-201ENSMUST00000166306 862 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Herc1E9PZP8 Gm37365-201ENSMUST00000193109 409 ntBASIC6.81□□□□□ -1.32
Herc1E9PZP8 Gm39147-202ENSMUST00000211730 882 ntTSL 5 BASIC6.81□□□□□ -1.32
Herc1E9PZP8 Ifitm1-201ENSMUST00000026564 736 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Herc1E9PZP8 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Herc1E9PZP8 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Herc1E9PZP8 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Herc1E9PZP8 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
Herc1E9PZP8 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC6.81□□□□□ -1.32
Herc1E9PZP8 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
Herc1E9PZP8 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Herc1E9PZP8 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Herc1E9PZP8 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
Herc1E9PZP8 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Herc1E9PZP8 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Herc1E9PZP8 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC6.81□□□□□ -1.32
Herc1E9PZP8 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
Herc1E9PZP8 Lims1-201ENSMUST00000020077 1565 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Herc1E9PZP8 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC6.81□□□□□ -1.32
Herc1E9PZP8 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Herc1E9PZP8 Trav13-2-201ENSMUST00000103658 390 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Herc1E9PZP8 Gm43851-201ENSMUST00000200726 327 ntTSL 3 BASIC6.81□□□□□ -1.32
Herc1E9PZP8 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Herc1E9PZP8 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Herc1E9PZP8 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Herc1E9PZP8 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Herc1E9PZP8 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Herc1E9PZP8 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Herc1E9PZP8 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Herc1E9PZP8 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Herc1E9PZP8 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
Herc1E9PZP8 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
Herc1E9PZP8 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC6.81□□□□□ -1.32
Herc1E9PZP8 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Herc1E9PZP8 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Herc1E9PZP8 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Herc1E9PZP8 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Herc1E9PZP8 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Herc1E9PZP8 Ing5-203ENSMUST00000190476 918 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Herc1E9PZP8 Gm44315-201ENSMUST00000203041 219 ntBASIC6.81□□□□□ -1.32
Herc1E9PZP8 Asf1a-204ENSMUST00000219271 725 ntTSL 5 BASIC6.81□□□□□ -1.32
Herc1E9PZP8 Tcl1b1-202ENSMUST00000222342 664 ntAPPRIS ALT2 TSL 2 BASIC6.81□□□□□ -1.32
Herc1E9PZP8 Gm2721-202ENSMUST00000222652 459 ntTSL 5 BASIC6.81□□□□□ -1.32
Herc1E9PZP8 Gm23458-201ENSMUST00000083257 169 ntBASIC6.81□□□□□ -1.32
Herc1E9PZP8 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Herc1E9PZP8 5330411J11Rik-201ENSMUST00000137162 1635 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Herc1E9PZP8 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Herc1E9PZP8 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Herc1E9PZP8 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Herc1E9PZP8 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Herc1E9PZP8 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
Herc1E9PZP8 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Herc1E9PZP8 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Herc1E9PZP8 Rab38-201ENSMUST00000107256 1577 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Herc1E9PZP8 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC6.8□□□□□ -1.32
Herc1E9PZP8 AC166359.1-201ENSMUST00000220243 1871 ntBASIC6.8□□□□□ -1.32
Herc1E9PZP8 Apoc2-203ENSMUST00000142352 727 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Herc1E9PZP8 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Herc1E9PZP8 Gm35412-201ENSMUST00000220437 999 ntBASIC6.8□□□□□ -1.32
Herc1E9PZP8 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC6.8□□□□□ -1.32
Herc1E9PZP8 Cst13-201ENSMUST00000046589 783 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Herc1E9PZP8 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Herc1E9PZP8 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Herc1E9PZP8 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
Herc1E9PZP8 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Herc1E9PZP8 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC6.8□□□□□ -1.32
Herc1E9PZP8 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Herc1E9PZP8 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
Herc1E9PZP8 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Herc1E9PZP8 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC6.8□□□□□ -1.32
Herc1E9PZP8 Gm42769-201ENSMUST00000198576 1659 ntBASIC6.8□□□□□ -1.32
Herc1E9PZP8 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Herc1E9PZP8 Gm23908-201ENSMUST00000104599 132 ntBASIC6.8□□□□□ -1.32
Herc1E9PZP8 Gm11244-201ENSMUST00000121243 237 ntBASIC6.8□□□□□ -1.32
Herc1E9PZP8 Eef1akmt1-201ENSMUST00000022518 880 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Herc1E9PZP8 AC101205.2-201ENSMUST00000226206 715 ntBASIC6.8□□□□□ -1.32
Herc1E9PZP8 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Herc1E9PZP8 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Herc1E9PZP8 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms