Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Pcdh17E9PXF0 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Pcdh17E9PXF0 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.52
Pcdh17E9PXF0 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC11.77□□□□□ -0.52
Pcdh17E9PXF0 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Pcdh17E9PXF0 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdh17E9PXF0 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdh17E9PXF0 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdh17E9PXF0 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Pcdh17E9PXF0 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdh17E9PXF0 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdh17E9PXF0 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdh17E9PXF0 Gm11531-201ENSMUST00000117614 555 ntBASIC11.77□□□□□ -0.53
Pcdh17E9PXF0 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
Pcdh17E9PXF0 Gm12291-201ENSMUST00000121627 311 ntBASIC11.77□□□□□ -0.53
Pcdh17E9PXF0 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdh17E9PXF0 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC11.77□□□□□ -0.53
Pcdh17E9PXF0 Gm4819-201ENSMUST00000182170 1009 ntBASIC11.77□□□□□ -0.53
Pcdh17E9PXF0 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC11.77□□□□□ -0.53
Pcdh17E9PXF0 Gm18827-201ENSMUST00000188341 790 ntBASIC11.77□□□□□ -0.53
Pcdh17E9PXF0 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC11.77□□□□□ -0.53
Pcdh17E9PXF0 Gm37466-201ENSMUST00000195692 652 ntBASIC11.77□□□□□ -0.53
Pcdh17E9PXF0 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Pcdh17E9PXF0 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC11.77□□□□□ -0.53
Pcdh17E9PXF0 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC11.77□□□□□ -0.53
Pcdh17E9PXF0 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdh17E9PXF0 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdh17E9PXF0 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC11.77□□□□□ -0.53
Pcdh17E9PXF0 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Pcdh17E9PXF0 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdh17E9PXF0 AC167669.2-201ENSMUST00000224417 1620 ntBASIC11.77□□□□□ -0.53
Pcdh17E9PXF0 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdh17E9PXF0 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdh17E9PXF0 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Pcdh17E9PXF0 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC11.77□□□□□ -0.53
Pcdh17E9PXF0 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdh17E9PXF0 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdh17E9PXF0 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdh17E9PXF0 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Pcdh17E9PXF0 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdh17E9PXF0 Gm26616-202ENSMUST00000195676 3107 ntBASIC11.77□□□□□ -0.53
Pcdh17E9PXF0 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdh17E9PXF0 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdh17E9PXF0 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdh17E9PXF0 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdh17E9PXF0 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC11.77□□□□□ -0.53
Pcdh17E9PXF0 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Pcdh17E9PXF0 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh17E9PXF0 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh17E9PXF0 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh17E9PXF0 Gm44891-201ENSMUST00000208817 2223 ntBASIC11.76□□□□□ -0.53
Pcdh17E9PXF0 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Pcdh17E9PXF0 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh17E9PXF0 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh17E9PXF0 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh17E9PXF0 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh17E9PXF0 Daam2-202ENSMUST00000224595 1926 ntBASIC11.76□□□□□ -0.53
Pcdh17E9PXF0 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Pcdh17E9PXF0 Pck2-205ENSMUST00000226352 2784 ntBASIC11.76□□□□□ -0.53
Pcdh17E9PXF0 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh17E9PXF0 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh17E9PXF0 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh17E9PXF0 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh17E9PXF0 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh17E9PXF0 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Pcdh17E9PXF0 Gm25214-201ENSMUST00000104573 129 ntBASIC11.76□□□□□ -0.53
Pcdh17E9PXF0 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh17E9PXF0 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC11.76□□□□□ -0.53
Pcdh17E9PXF0 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh17E9PXF0 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Pcdh17E9PXF0 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh17E9PXF0 Gm2383-201ENSMUST00000181461 807 ntBASIC11.76□□□□□ -0.53
Pcdh17E9PXF0 Gm5597-201ENSMUST00000182353 1193 ntBASIC11.76□□□□□ -0.53
Pcdh17E9PXF0 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Pcdh17E9PXF0 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC11.76□□□□□ -0.53
Pcdh17E9PXF0 Gm5950-201ENSMUST00000213337 772 ntBASIC11.76□□□□□ -0.53
Pcdh17E9PXF0 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh17E9PXF0 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Pcdh17E9PXF0 Gm22058-201ENSMUST00000083393 310 ntBASIC11.76□□□□□ -0.53
Pcdh17E9PXF0 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC11.76□□□□□ -0.53
Pcdh17E9PXF0 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh17E9PXF0 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC11.76□□□□□ -0.53
Pcdh17E9PXF0 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh17E9PXF0 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh17E9PXF0 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh17E9PXF0 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh17E9PXF0 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh17E9PXF0 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh17E9PXF0 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh17E9PXF0 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh17E9PXF0 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh17E9PXF0 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh17E9PXF0 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC11.76□□□□□ -0.53
Pcdh17E9PXF0 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh17E9PXF0 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh17E9PXF0 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh17E9PXF0 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh17E9PXF0 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh17E9PXF0 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh17E9PXF0 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms