Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col6a3E9PWQ3 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col6a3E9PWQ3 Gm14820-201ENSMUST00000126286 1449 ntTSL 3 BASIC12.23□□□□□ -0.45
Col6a3E9PWQ3 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Col6a3E9PWQ3 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Col6a3E9PWQ3 Gm9673-201ENSMUST00000119287 781 ntBASIC12.23□□□□□ -0.45
Col6a3E9PWQ3 Gm12129-201ENSMUST00000120104 1147 ntBASIC12.23□□□□□ -0.45
Col6a3E9PWQ3 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC12.23□□□□□ -0.45
Col6a3E9PWQ3 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col6a3E9PWQ3 Mir339-201ENSMUST00000083659 96 ntBASIC12.23□□□□□ -0.45
Col6a3E9PWQ3 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Col6a3E9PWQ3 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col6a3E9PWQ3 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col6a3E9PWQ3 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC12.23□□□□□ -0.45
Col6a3E9PWQ3 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col6a3E9PWQ3 Platr19-201ENSMUST00000171380 1466 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Col6a3E9PWQ3 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC12.23□□□□□ -0.45
Col6a3E9PWQ3 Gm37014-201ENSMUST00000194723 2253 ntBASIC12.23□□□□□ -0.45
Col6a3E9PWQ3 Gm8152-201ENSMUST00000120842 637 ntBASIC12.22□□□□□ -0.45
Col6a3E9PWQ3 Gm16217-201ENSMUST00000124182 616 ntTSL 3 BASIC12.22□□□□□ -0.45
Col6a3E9PWQ3 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC12.22□□□□□ -0.45
Col6a3E9PWQ3 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC12.22□□□□□ -0.45
Col6a3E9PWQ3 Gm5851-201ENSMUST00000194132 1204 ntBASIC12.22□□□□□ -0.45
Col6a3E9PWQ3 Gm7815-201ENSMUST00000196104 832 ntBASIC12.22□□□□□ -0.45
Col6a3E9PWQ3 Gm9736-201ENSMUST00000219969 834 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Col6a3E9PWQ3 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC12.22□□□□□ -0.45
Col6a3E9PWQ3 Gm21451-201ENSMUST00000111062 2775 ntBASIC12.22□□□□□ -0.45
Col6a3E9PWQ3 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Col6a3E9PWQ3 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Col6a3E9PWQ3 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col6a3E9PWQ3 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col6a3E9PWQ3 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Col6a3E9PWQ3 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col6a3E9PWQ3 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col6a3E9PWQ3 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col6a3E9PWQ3 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC12.22□□□□□ -0.45
Col6a3E9PWQ3 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Col6a3E9PWQ3 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Col6a3E9PWQ3 Gm24294-201ENSMUST00000158295 277 ntBASIC12.22□□□□□ -0.45
Col6a3E9PWQ3 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Col6a3E9PWQ3 Gm43966-201ENSMUST00000203301 612 ntBASIC12.22□□□□□ -0.45
Col6a3E9PWQ3 Gm30731-201ENSMUST00000203909 825 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Col6a3E9PWQ3 Gm9644-201ENSMUST00000212828 1183 ntBASIC12.22□□□□□ -0.45
Col6a3E9PWQ3 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC12.22□□□□□ -0.45
Col6a3E9PWQ3 Gm43598-201ENSMUST00000202482 2479 ntBASIC12.22□□□□□ -0.45
Col6a3E9PWQ3 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Col6a3E9PWQ3 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col6a3E9PWQ3 Arxes1-201ENSMUST00000057625 1580 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Col6a3E9PWQ3 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col6a3E9PWQ3 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col6a3E9PWQ3 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col6a3E9PWQ3 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col6a3E9PWQ3 Gm23745-201ENSMUST00000104230 125 ntBASIC12.22□□□□□ -0.45
Col6a3E9PWQ3 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Col6a3E9PWQ3 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC12.22□□□□□ -0.45
Col6a3E9PWQ3 Gm16283-201ENSMUST00000149935 522 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Col6a3E9PWQ3 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC12.22□□□□□ -0.45
Col6a3E9PWQ3 Gm28826-201ENSMUST00000190006 488 ntTSL 2 BASIC12.22□□□□□ -0.45
Col6a3E9PWQ3 AC122840.4-201ENSMUST00000221310 1285 ntTSL 5 BASIC12.22□□□□□ -0.45
Col6a3E9PWQ3 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
Col6a3E9PWQ3 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.22□□□□□ -0.45
Col6a3E9PWQ3 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Col6a3E9PWQ3 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col6a3E9PWQ3 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Col6a3E9PWQ3 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col6a3E9PWQ3 Gm6612-201ENSMUST00000170777 395 ntBASIC12.21□□□□□ -0.45
Col6a3E9PWQ3 Gm6216-201ENSMUST00000182390 687 ntBASIC12.21□□□□□ -0.45
Col6a3E9PWQ3 Gm18010-201ENSMUST00000203553 202 ntBASIC12.21□□□□□ -0.45
Col6a3E9PWQ3 Gm30671-201ENSMUST00000214898 318 ntBASIC12.21□□□□□ -0.45
Col6a3E9PWQ3 Krtap12-1-201ENSMUST00000092370 656 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Col6a3E9PWQ3 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC12.21□□□□□ -0.45
Col6a3E9PWQ3 Psmc1-201ENSMUST00000021595 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col6a3E9PWQ3 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.21□□□□□ -0.45
Col6a3E9PWQ3 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC12.21□□□□□ -0.45
Col6a3E9PWQ3 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col6a3E9PWQ3 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col6a3E9PWQ3 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col6a3E9PWQ3 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC12.21□□□□□ -0.45
Col6a3E9PWQ3 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Col6a3E9PWQ3 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col6a3E9PWQ3 Ppp1r32-201ENSMUST00000038842 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col6a3E9PWQ3 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col6a3E9PWQ3 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col6a3E9PWQ3 Klk1b5-201ENSMUST00000074359 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col6a3E9PWQ3 Polr3c-205ENSMUST00000141377 808 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Col6a3E9PWQ3 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Col6a3E9PWQ3 AC103672.1-201ENSMUST00000227502 365 ntBASIC12.21□□□□□ -0.45
Col6a3E9PWQ3 Olfr1417-201ENSMUST00000061235 948 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Col6a3E9PWQ3 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC12.21□□□□□ -0.45
Col6a3E9PWQ3 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Col6a3E9PWQ3 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Col6a3E9PWQ3 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Col6a3E9PWQ3 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Col6a3E9PWQ3 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Col6a3E9PWQ3 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Col6a3E9PWQ3 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Col6a3E9PWQ3 AC154671.1-201ENSMUST00000228617 1578 ntBASIC12.21□□□□□ -0.46
Col6a3E9PWQ3 Gpr143-201ENSMUST00000026383 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Col6a3E9PWQ3 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Col6a3E9PWQ3 2700038G22Rik-201ENSMUST00000181574 1375 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms