Protein–RNA interactions for Protein: B9EKI3

Tmf1, TATA element modulatory factor, mousemouse

Predictions only

Length 1,091 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmf1B9EKI3 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tmf1B9EKI3 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tmf1B9EKI3 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tmf1B9EKI3 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
Tmf1B9EKI3 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Tmf1B9EKI3 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tmf1B9EKI3 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tmf1B9EKI3 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tmf1B9EKI3 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tmf1B9EKI3 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Tmf1B9EKI3 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tmf1B9EKI3 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC17.04■□□□□ 0.32
Tmf1B9EKI3 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tmf1B9EKI3 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC17.04■□□□□ 0.32
Tmf1B9EKI3 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tmf1B9EKI3 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Tmf1B9EKI3 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tmf1B9EKI3 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tmf1B9EKI3 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tmf1B9EKI3 Gm15547-201ENSMUST00000122152 333 ntBASIC17.04■□□□□ 0.32
Tmf1B9EKI3 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Tmf1B9EKI3 Gm23119-201ENSMUST00000158610 140 ntBASIC17.04■□□□□ 0.32
Tmf1B9EKI3 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tmf1B9EKI3 Gm28882-201ENSMUST00000185504 314 ntBASIC17.04■□□□□ 0.32
Tmf1B9EKI3 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
Tmf1B9EKI3 AC155637.1-201ENSMUST00000218560 636 ntBASIC17.04■□□□□ 0.32
Tmf1B9EKI3 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC17.04■□□□□ 0.32
Tmf1B9EKI3 Nsd1-205ENSMUST00000224693 852 ntBASIC17.04■□□□□ 0.32
Tmf1B9EKI3 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tmf1B9EKI3 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tmf1B9EKI3 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Tmf1B9EKI3 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Tmf1B9EKI3 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tmf1B9EKI3 Gm5884-201ENSMUST00000036712 1479 ntBASIC17.04■□□□□ 0.32
Tmf1B9EKI3 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Tmf1B9EKI3 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tmf1B9EKI3 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC17.04■□□□□ 0.32
Tmf1B9EKI3 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tmf1B9EKI3 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tmf1B9EKI3 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tmf1B9EKI3 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tmf1B9EKI3 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tmf1B9EKI3 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tmf1B9EKI3 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tmf1B9EKI3 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tmf1B9EKI3 Gm4735-201ENSMUST00000138679 1302 ntBASIC17.03■□□□□ 0.32
Tmf1B9EKI3 Gm8862-201ENSMUST00000198379 1346 ntBASIC17.03■□□□□ 0.32
Tmf1B9EKI3 Gm5855-201ENSMUST00000200240 1305 ntBASIC17.03■□□□□ 0.32
Tmf1B9EKI3 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tmf1B9EKI3 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Tmf1B9EKI3 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tmf1B9EKI3 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC17.03■□□□□ 0.32
Tmf1B9EKI3 Gm11930-201ENSMUST00000117788 190 ntBASIC17.03■□□□□ 0.32
Tmf1B9EKI3 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Tmf1B9EKI3 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Tmf1B9EKI3 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC17.03■□□□□ 0.32
Tmf1B9EKI3 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC17.03■□□□□ 0.32
Tmf1B9EKI3 Gm43138-201ENSMUST00000199123 708 ntBASIC17.03■□□□□ 0.32
Tmf1B9EKI3 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC17.03■□□□□ 0.32
Tmf1B9EKI3 Gm5363-201ENSMUST00000211927 938 ntBASIC17.03■□□□□ 0.32
Tmf1B9EKI3 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tmf1B9EKI3 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Tmf1B9EKI3 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tmf1B9EKI3 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC17.03■□□□□ 0.32
Tmf1B9EKI3 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tmf1B9EKI3 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Tmf1B9EKI3 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tmf1B9EKI3 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tmf1B9EKI3 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tmf1B9EKI3 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Tmf1B9EKI3 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tmf1B9EKI3 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Tmf1B9EKI3 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tmf1B9EKI3 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tmf1B9EKI3 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC17.02■□□□□ 0.32
Tmf1B9EKI3 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Tmf1B9EKI3 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Tmf1B9EKI3 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Tmf1B9EKI3 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
Tmf1B9EKI3 Gm38385-201ENSMUST00000194454 2351 ntBASIC17.02■□□□□ 0.32
Tmf1B9EKI3 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Tmf1B9EKI3 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Tmf1B9EKI3 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Tmf1B9EKI3 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Tmf1B9EKI3 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Tmf1B9EKI3 Gm12749-201ENSMUST00000122138 1159 ntBASIC17.02■□□□□ 0.32
Tmf1B9EKI3 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC17.02■□□□□ 0.32
Tmf1B9EKI3 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Tmf1B9EKI3 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC17.02■□□□□ 0.32
Tmf1B9EKI3 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC17.02■□□□□ 0.32
Tmf1B9EKI3 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Tmf1B9EKI3 Gm42937-201ENSMUST00000197360 752 ntBASIC17.02■□□□□ 0.32
Tmf1B9EKI3 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Tmf1B9EKI3 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Tmf1B9EKI3 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC17.02■□□□□ 0.31
Tmf1B9EKI3 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Tmf1B9EKI3 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Tmf1B9EKI3 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Tmf1B9EKI3 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Tmf1B9EKI3 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms