Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Gm12887B1AVM1 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Gm12887B1AVM1 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC10.19□□□□□ -0.78
Gm12887B1AVM1 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Gm12887B1AVM1 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Gm12887B1AVM1 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Gm12887B1AVM1 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
Gm12887B1AVM1 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Gm12887B1AVM1 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Gm12887B1AVM1 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Gm12887B1AVM1 Gm38187-201ENSMUST00000195609 4709 ntBASIC10.18□□□□□ -0.78
Gm12887B1AVM1 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Gm12887B1AVM1 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC10.18□□□□□ -0.78
Gm12887B1AVM1 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Gm12887B1AVM1 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Gm12887B1AVM1 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Gm12887B1AVM1 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Gm12887B1AVM1 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Gm12887B1AVM1 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Gm12887B1AVM1 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Gm12887B1AVM1 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Gm12887B1AVM1 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Gm12887B1AVM1 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Gm12887B1AVM1 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Gm12887B1AVM1 Gm18630-201ENSMUST00000222109 1397 ntBASIC10.18□□□□□ -0.78
Gm12887B1AVM1 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Gm12887B1AVM1 Gm9755-201ENSMUST00000032981 1356 ntBASIC10.18□□□□□ -0.78
Gm12887B1AVM1 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Gm12887B1AVM1 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
Gm12887B1AVM1 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC10.18□□□□□ -0.78
Gm12887B1AVM1 AC154767.3-201ENSMUST00000225150 1342 ntBASIC10.18□□□□□ -0.78
Gm12887B1AVM1 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Gm12887B1AVM1 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC10.18□□□□□ -0.78
Gm12887B1AVM1 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Gm12887B1AVM1 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Gm12887B1AVM1 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Gm12887B1AVM1 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Gm12887B1AVM1 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Gm12887B1AVM1 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Gm12887B1AVM1 Gm4204-201ENSMUST00000110798 1231 ntBASIC10.18□□□□□ -0.78
Gm12887B1AVM1 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Gm12887B1AVM1 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC10.18□□□□□ -0.78
Gm12887B1AVM1 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC10.18□□□□□ -0.78
Gm12887B1AVM1 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC10.18□□□□□ -0.78
Gm12887B1AVM1 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
Gm12887B1AVM1 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Gm12887B1AVM1 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Gm12887B1AVM1 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Gm12887B1AVM1 Gm37277-201ENSMUST00000194052 1111 ntBASIC10.18□□□□□ -0.78
Gm12887B1AVM1 Gm35960-201ENSMUST00000202712 767 ntBASIC10.18□□□□□ -0.78
Gm12887B1AVM1 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Gm12887B1AVM1 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Gm12887B1AVM1 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Gm12887B1AVM1 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Gm12887B1AVM1 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Gm12887B1AVM1 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Gm12887B1AVM1 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Gm12887B1AVM1 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Gm12887B1AVM1 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC10.18□□□□□ -0.78
Gm12887B1AVM1 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Gm12887B1AVM1 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Gm12887B1AVM1 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Gm12887B1AVM1 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Gm12887B1AVM1 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Gm12887B1AVM1 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC10.18□□□□□ -0.78
Gm12887B1AVM1 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Gm12887B1AVM1 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Gm12887B1AVM1 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Gm12887B1AVM1 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC10.18□□□□□ -0.78
Gm12887B1AVM1 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Gm12887B1AVM1 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Gm12887B1AVM1 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Gm12887B1AVM1 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Gm12887B1AVM1 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Gm12887B1AVM1 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Gm12887B1AVM1 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC10.17□□□□□ -0.78
Gm12887B1AVM1 Abhd6-203ENSMUST00000225234 1958 ntBASIC10.17□□□□□ -0.78
Gm12887B1AVM1 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Gm12887B1AVM1 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC10.17□□□□□ -0.78
Gm12887B1AVM1 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Gm12887B1AVM1 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Gm12887B1AVM1 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Gm12887B1AVM1 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Gm12887B1AVM1 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Gm12887B1AVM1 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC10.17□□□□□ -0.78
Gm12887B1AVM1 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC10.17□□□□□ -0.78
Gm12887B1AVM1 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Gm12887B1AVM1 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Gm12887B1AVM1 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Gm12887B1AVM1 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Gm12887B1AVM1 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Gm12887B1AVM1 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Gm12887B1AVM1 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Gm12887B1AVM1 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Gm12887B1AVM1 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Gm12887B1AVM1 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC10.17□□□□□ -0.78
Gm12887B1AVM1 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC10.17□□□□□ -0.78
Gm12887B1AVM1 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Gm12887B1AVM1 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC10.17□□□□□ -0.78
Gm12887B1AVM1 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms