Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col4a6B1AVK5 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.71□□□□□ -0.37
Col4a6B1AVK5 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Col4a6B1AVK5 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Col4a6B1AVK5 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Col4a6B1AVK5 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Col4a6B1AVK5 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Col4a6B1AVK5 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Col4a6B1AVK5 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Col4a6B1AVK5 Gm6903-201ENSMUST00000160509 1366 ntBASIC12.71□□□□□ -0.38
Col4a6B1AVK5 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.38
Col4a6B1AVK5 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC12.71□□□□□ -0.38
Col4a6B1AVK5 Gm45546-201ENSMUST00000211053 2394 ntBASIC12.7□□□□□ -0.38
Col4a6B1AVK5 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col4a6B1AVK5 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC12.7□□□□□ -0.38
Col4a6B1AVK5 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Col4a6B1AVK5 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC12.7□□□□□ -0.38
Col4a6B1AVK5 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Col4a6B1AVK5 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col4a6B1AVK5 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Col4a6B1AVK5 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC12.7□□□□□ -0.38
Col4a6B1AVK5 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col4a6B1AVK5 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col4a6B1AVK5 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Col4a6B1AVK5 Mirlet7i-201ENSMUST00000083472 85 ntBASIC12.7□□□□□ -0.38
Col4a6B1AVK5 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col4a6B1AVK5 Olfr1230-201ENSMUST00000099787 918 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Col4a6B1AVK5 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col4a6B1AVK5 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col4a6B1AVK5 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC12.7□□□□□ -0.38
Col4a6B1AVK5 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col4a6B1AVK5 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Col4a6B1AVK5 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Col4a6B1AVK5 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Col4a6B1AVK5 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Col4a6B1AVK5 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.7□□□□□ -0.38
Col4a6B1AVK5 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Col4a6B1AVK5 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Col4a6B1AVK5 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col4a6B1AVK5 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col4a6B1AVK5 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col4a6B1AVK5 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Col4a6B1AVK5 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col4a6B1AVK5 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC12.7□□□□□ -0.38
Col4a6B1AVK5 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col4a6B1AVK5 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC12.7□□□□□ -0.38
Col4a6B1AVK5 Gm11949-201ENSMUST00000117640 372 ntBASIC12.7□□□□□ -0.38
Col4a6B1AVK5 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC12.7□□□□□ -0.38
Col4a6B1AVK5 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Col4a6B1AVK5 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
Col4a6B1AVK5 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Col4a6B1AVK5 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.7□□□□□ -0.38
Col4a6B1AVK5 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC12.7□□□□□ -0.38
Col4a6B1AVK5 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col4a6B1AVK5 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col4a6B1AVK5 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col4a6B1AVK5 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col4a6B1AVK5 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col4a6B1AVK5 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Col4a6B1AVK5 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Col4a6B1AVK5 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col4a6B1AVK5 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
Col4a6B1AVK5 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Col4a6B1AVK5 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col4a6B1AVK5 Gm13384-201ENSMUST00000117166 1344 ntBASIC12.69□□□□□ -0.38
Col4a6B1AVK5 Gm4735-201ENSMUST00000138679 1302 ntBASIC12.69□□□□□ -0.38
Col4a6B1AVK5 Gm5855-201ENSMUST00000200240 1305 ntBASIC12.69□□□□□ -0.38
Col4a6B1AVK5 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col4a6B1AVK5 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
Col4a6B1AVK5 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Col4a6B1AVK5 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
Col4a6B1AVK5 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col4a6B1AVK5 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col4a6B1AVK5 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col4a6B1AVK5 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col4a6B1AVK5 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col4a6B1AVK5 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col4a6B1AVK5 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col4a6B1AVK5 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.69□□□□□ -0.38
Col4a6B1AVK5 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col4a6B1AVK5 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
Col4a6B1AVK5 Gm14193-201ENSMUST00000105067 153 ntBASIC12.69□□□□□ -0.38
Col4a6B1AVK5 Gm12516-201ENSMUST00000120819 385 ntBASIC12.69□□□□□ -0.38
Col4a6B1AVK5 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Col4a6B1AVK5 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Col4a6B1AVK5 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC12.69□□□□□ -0.38
Col4a6B1AVK5 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Col4a6B1AVK5 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC12.69□□□□□ -0.38
Col4a6B1AVK5 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Col4a6B1AVK5 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col4a6B1AVK5 AC165260.2-203ENSMUST00000224237 336 ntBASIC12.69□□□□□ -0.38
Col4a6B1AVK5 Prrxl1-205ENSMUST00000228878 723 ntBASIC12.69□□□□□ -0.38
Col4a6B1AVK5 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col4a6B1AVK5 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Col4a6B1AVK5 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col4a6B1AVK5 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col4a6B1AVK5 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col4a6B1AVK5 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col4a6B1AVK5 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Col4a6B1AVK5 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 92.1 ms