Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scn1aA2APX8 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Scn1aA2APX8 Adra1a-206ENSMUST00000225182 2337 ntBASIC13.14□□□□□ -0.31
Scn1aA2APX8 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Scn1aA2APX8 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Scn1aA2APX8 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Scn1aA2APX8 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scn1aA2APX8 Gm43908-201ENSMUST00000205074 1472 ntBASIC13.14□□□□□ -0.31
Scn1aA2APX8 Gm18227-201ENSMUST00000211082 1468 ntBASIC13.14□□□□□ -0.31
Scn1aA2APX8 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Scn1aA2APX8 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scn1aA2APX8 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC13.14□□□□□ -0.31
Scn1aA2APX8 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scn1aA2APX8 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scn1aA2APX8 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scn1aA2APX8 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Scn1aA2APX8 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.14□□□□□ -0.31
Scn1aA2APX8 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scn1aA2APX8 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scn1aA2APX8 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Scn1aA2APX8 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scn1aA2APX8 Gm12286-201ENSMUST00000119246 1002 ntBASIC13.14□□□□□ -0.31
Scn1aA2APX8 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC13.14□□□□□ -0.31
Scn1aA2APX8 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scn1aA2APX8 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC13.14□□□□□ -0.31
Scn1aA2APX8 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC13.14□□□□□ -0.31
Scn1aA2APX8 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Scn1aA2APX8 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC13.14□□□□□ -0.31
Scn1aA2APX8 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC13.14□□□□□ -0.31
Scn1aA2APX8 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Scn1aA2APX8 Gm8913-201ENSMUST00000209491 641 ntBASIC13.14□□□□□ -0.31
Scn1aA2APX8 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC13.14□□□□□ -0.31
Scn1aA2APX8 AC154252.2-201ENSMUST00000223593 767 ntBASIC13.14□□□□□ -0.31
Scn1aA2APX8 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scn1aA2APX8 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scn1aA2APX8 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scn1aA2APX8 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Scn1aA2APX8 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scn1aA2APX8 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scn1aA2APX8 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scn1aA2APX8 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC13.14□□□□□ -0.31
Scn1aA2APX8 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Scn1aA2APX8 Gm10782-202ENSMUST00000223775 1480 ntBASIC13.14□□□□□ -0.31
Scn1aA2APX8 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
Scn1aA2APX8 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scn1aA2APX8 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scn1aA2APX8 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scn1aA2APX8 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scn1aA2APX8 Gm37437-201ENSMUST00000194451 1937 ntBASIC13.14□□□□□ -0.31
Scn1aA2APX8 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scn1aA2APX8 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC13.14□□□□□ -0.31
Scn1aA2APX8 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scn1aA2APX8 Gm44292-201ENSMUST00000205194 2364 ntBASIC13.14□□□□□ -0.31
Scn1aA2APX8 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Scn1aA2APX8 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC13.14□□□□□ -0.31
Scn1aA2APX8 Gm44758-201ENSMUST00000206096 2068 ntBASIC13.13□□□□□ -0.31
Scn1aA2APX8 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC13.13□□□□□ -0.31
Scn1aA2APX8 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scn1aA2APX8 Gm24934-201ENSMUST00000103764 111 ntBASIC13.13□□□□□ -0.31
Scn1aA2APX8 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scn1aA2APX8 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Scn1aA2APX8 Gm27341-201ENSMUST00000183570 106 ntBASIC13.13□□□□□ -0.31
Scn1aA2APX8 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC13.13□□□□□ -0.31
Scn1aA2APX8 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC13.13□□□□□ -0.31
Scn1aA2APX8 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC13.13□□□□□ -0.31
Scn1aA2APX8 AC166344.1-202ENSMUST00000224139 234 ntBASIC13.13□□□□□ -0.31
Scn1aA2APX8 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scn1aA2APX8 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scn1aA2APX8 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scn1aA2APX8 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scn1aA2APX8 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC13.13□□□□□ -0.31
Scn1aA2APX8 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Scn1aA2APX8 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Scn1aA2APX8 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Scn1aA2APX8 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scn1aA2APX8 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scn1aA2APX8 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scn1aA2APX8 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scn1aA2APX8 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scn1aA2APX8 Gm4735-201ENSMUST00000138679 1302 ntBASIC13.13□□□□□ -0.31
Scn1aA2APX8 Gm5855-201ENSMUST00000200240 1305 ntBASIC13.13□□□□□ -0.31
Scn1aA2APX8 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Scn1aA2APX8 AC126262.1-201ENSMUST00000221802 1904 ntBASIC13.13□□□□□ -0.31
Scn1aA2APX8 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Scn1aA2APX8 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
Scn1aA2APX8 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC13.13□□□□□ -0.31
Scn1aA2APX8 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scn1aA2APX8 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scn1aA2APX8 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC13.13□□□□□ -0.31
Scn1aA2APX8 CT030182.1-201ENSMUST00000225935 533 ntBASIC13.13□□□□□ -0.31
Scn1aA2APX8 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Scn1aA2APX8 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Scn1aA2APX8 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scn1aA2APX8 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scn1aA2APX8 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scn1aA2APX8 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scn1aA2APX8 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC13.13□□□□□ -0.31
Scn1aA2APX8 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Scn1aA2APX8 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Scn1aA2APX8 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 94 ms