Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc112A0AUP1 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC14.4□□□□□ -0.1
Ccdc112A0AUP1 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc112A0AUP1 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC14.4□□□□□ -0.1
Ccdc112A0AUP1 AC165260.3-202ENSMUST00000224550 1031 ntBASIC14.4□□□□□ -0.1
Ccdc112A0AUP1 AC110817.1-201ENSMUST00000225706 605 ntBASIC14.4□□□□□ -0.1
Ccdc112A0AUP1 AC155237.1-201ENSMUST00000226196 1279 ntBASIC14.4□□□□□ -0.1
Ccdc112A0AUP1 CT025535.1-201ENSMUST00000227172 491 ntBASIC14.4□□□□□ -0.1
Ccdc112A0AUP1 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Ccdc112A0AUP1 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc112A0AUP1 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc112A0AUP1 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc112A0AUP1 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC14.4□□□□□ -0.1
Ccdc112A0AUP1 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc112A0AUP1 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc112A0AUP1 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc112A0AUP1 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc112A0AUP1 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc112A0AUP1 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc112A0AUP1 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc112A0AUP1 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc112A0AUP1 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc112A0AUP1 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC14.4□□□□□ -0.1
Ccdc112A0AUP1 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Ccdc112A0AUP1 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc112A0AUP1 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc112A0AUP1 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
Ccdc112A0AUP1 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc112A0AUP1 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
Ccdc112A0AUP1 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc112A0AUP1 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc112A0AUP1 Gm44775-201ENSMUST00000207266 1456 ntBASIC14.39□□□□□ -0.11
Ccdc112A0AUP1 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc112A0AUP1 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc112A0AUP1 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc112A0AUP1 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc112A0AUP1 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc112A0AUP1 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC14.39□□□□□ -0.11
Ccdc112A0AUP1 Gm14928-201ENSMUST00000120198 477 ntBASIC14.39□□□□□ -0.11
Ccdc112A0AUP1 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC14.39□□□□□ -0.11
Ccdc112A0AUP1 Gm11918-201ENSMUST00000121660 179 ntBASIC14.39□□□□□ -0.11
Ccdc112A0AUP1 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC14.39□□□□□ -0.11
Ccdc112A0AUP1 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc112A0AUP1 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc112A0AUP1 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC14.39□□□□□ -0.11
Ccdc112A0AUP1 Gm9908-201ENSMUST00000211534 448 ntBASIC14.39□□□□□ -0.11
Ccdc112A0AUP1 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
Ccdc112A0AUP1 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc112A0AUP1 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc112A0AUP1 Gm10146-201ENSMUST00000072739 309 ntBASIC14.39□□□□□ -0.11
Ccdc112A0AUP1 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Ccdc112A0AUP1 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc112A0AUP1 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc112A0AUP1 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc112A0AUP1 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc112A0AUP1 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc112A0AUP1 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Ccdc112A0AUP1 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc112A0AUP1 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC14.39□□□□□ -0.11
Ccdc112A0AUP1 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc112A0AUP1 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc112A0AUP1 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc112A0AUP1 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc112A0AUP1 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc112A0AUP1 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Ccdc112A0AUP1 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc112A0AUP1 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC14.38□□□□□ -0.11
Ccdc112A0AUP1 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Ccdc112A0AUP1 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc112A0AUP1 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc112A0AUP1 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc112A0AUP1 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc112A0AUP1 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc112A0AUP1 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc112A0AUP1 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Ccdc112A0AUP1 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc112A0AUP1 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc112A0AUP1 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc112A0AUP1 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Ccdc112A0AUP1 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC14.38□□□□□ -0.11
Ccdc112A0AUP1 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC14.38□□□□□ -0.11
Ccdc112A0AUP1 Gm24196-201ENSMUST00000179161 110 ntBASIC14.38□□□□□ -0.11
Ccdc112A0AUP1 CT030657.3-201ENSMUST00000222707 1200 ntBASIC14.38□□□□□ -0.11
Ccdc112A0AUP1 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc112A0AUP1 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc112A0AUP1 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc112A0AUP1 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC14.38□□□□□ -0.11
Ccdc112A0AUP1 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC14.38□□□□□ -0.11
Ccdc112A0AUP1 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Ccdc112A0AUP1 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC14.38□□□□□ -0.11
Ccdc112A0AUP1 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc112A0AUP1 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc112A0AUP1 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc112A0AUP1 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Ccdc112A0AUP1 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc112A0AUP1 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc112A0AUP1 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc112A0AUP1 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc112A0AUP1 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Ccdc112A0AUP1 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms