Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc194A0A140LIT1 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc194A0A140LIT1 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc194A0A140LIT1 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc194A0A140LIT1 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc194A0A140LIT1 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc194A0A140LIT1 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc194A0A140LIT1 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc194A0A140LIT1 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc194A0A140LIT1 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc194A0A140LIT1 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc194A0A140LIT1 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc194A0A140LIT1 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Ccdc194A0A140LIT1 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc194A0A140LIT1 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Ccdc194A0A140LIT1 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc194A0A140LIT1 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc194A0A140LIT1 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc194A0A140LIT1 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc194A0A140LIT1 Gm11803-201ENSMUST00000119966 444 ntBASIC12.55□□□□□ -0.4
Ccdc194A0A140LIT1 Gm9630-201ENSMUST00000178304 885 ntBASIC12.55□□□□□ -0.4
Ccdc194A0A140LIT1 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC12.55□□□□□ -0.4
Ccdc194A0A140LIT1 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.55□□□□□ -0.4
Ccdc194A0A140LIT1 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc194A0A140LIT1 CT030657.3-201ENSMUST00000222707 1200 ntBASIC12.55□□□□□ -0.4
Ccdc194A0A140LIT1 Gm2824-203ENSMUST00000226189 1228 ntBASIC12.55□□□□□ -0.4
Ccdc194A0A140LIT1 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.55□□□□□ -0.4
Ccdc194A0A140LIT1 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc194A0A140LIT1 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC12.55□□□□□ -0.4
Ccdc194A0A140LIT1 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc194A0A140LIT1 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc194A0A140LIT1 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc194A0A140LIT1 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc194A0A140LIT1 Gm4735-201ENSMUST00000138679 1302 ntBASIC12.55□□□□□ -0.4
Ccdc194A0A140LIT1 Gm5855-201ENSMUST00000200240 1305 ntBASIC12.55□□□□□ -0.4
Ccdc194A0A140LIT1 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc194A0A140LIT1 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC12.55□□□□□ -0.4
Ccdc194A0A140LIT1 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc194A0A140LIT1 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC12.55□□□□□ -0.4
Ccdc194A0A140LIT1 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc194A0A140LIT1 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc194A0A140LIT1 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Ccdc194A0A140LIT1 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Ccdc194A0A140LIT1 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccdc194A0A140LIT1 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc194A0A140LIT1 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.54□□□□□ -0.4
Ccdc194A0A140LIT1 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc194A0A140LIT1 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc194A0A140LIT1 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc194A0A140LIT1 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc194A0A140LIT1 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc194A0A140LIT1 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc194A0A140LIT1 Gm26684-202ENSMUST00000228229 8257 ntBASIC12.54□□□□□ -0.4
Ccdc194A0A140LIT1 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Ccdc194A0A140LIT1 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc194A0A140LIT1 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc194A0A140LIT1 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc194A0A140LIT1 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
Ccdc194A0A140LIT1 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Ccdc194A0A140LIT1 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC12.54□□□□□ -0.4
Ccdc194A0A140LIT1 Gm12203-201ENSMUST00000118235 598 ntBASIC12.54□□□□□ -0.4
Ccdc194A0A140LIT1 Gm13369-201ENSMUST00000119442 987 ntBASIC12.54□□□□□ -0.4
Ccdc194A0A140LIT1 Gm12209-201ENSMUST00000120089 596 ntBASIC12.54□□□□□ -0.4
Ccdc194A0A140LIT1 Mir1894-201ENSMUST00000122802 81 ntBASIC12.54□□□□□ -0.4
Ccdc194A0A140LIT1 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc194A0A140LIT1 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC12.54□□□□□ -0.4
Ccdc194A0A140LIT1 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc194A0A140LIT1 Gm6244-201ENSMUST00000178732 841 ntBASIC12.54□□□□□ -0.4
Ccdc194A0A140LIT1 Gm37042-201ENSMUST00000193816 581 ntBASIC12.54□□□□□ -0.4
Ccdc194A0A140LIT1 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC12.54□□□□□ -0.4
Ccdc194A0A140LIT1 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC12.54□□□□□ -0.4
Ccdc194A0A140LIT1 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC12.54□□□□□ -0.4
Ccdc194A0A140LIT1 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc194A0A140LIT1 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Ccdc194A0A140LIT1 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Ccdc194A0A140LIT1 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Ccdc194A0A140LIT1 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Ccdc194A0A140LIT1 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc194A0A140LIT1 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc194A0A140LIT1 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc194A0A140LIT1 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc194A0A140LIT1 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc194A0A140LIT1 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc194A0A140LIT1 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc194A0A140LIT1 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc194A0A140LIT1 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC12.54□□□□□ -0.4
Ccdc194A0A140LIT1 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.54□□□□□ -0.4
Ccdc194A0A140LIT1 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Ccdc194A0A140LIT1 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.54□□□□□ -0.4
Ccdc194A0A140LIT1 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc194A0A140LIT1 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc194A0A140LIT1 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc194A0A140LIT1 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc194A0A140LIT1 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc194A0A140LIT1 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc194A0A140LIT1 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc194A0A140LIT1 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc194A0A140LIT1 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc194A0A140LIT1 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc194A0A140LIT1 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms