Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC12.62□□□□□ -0.39
H2afb2S4R1M3 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
H2afb2S4R1M3 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
H2afb2S4R1M3 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
H2afb2S4R1M3 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC12.62□□□□□ -0.39
H2afb2S4R1M3 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC12.62□□□□□ -0.39
H2afb2S4R1M3 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
H2afb2S4R1M3 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
H2afb2S4R1M3 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
H2afb2S4R1M3 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
H2afb2S4R1M3 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC12.62□□□□□ -0.39
H2afb2S4R1M3 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC12.62□□□□□ -0.39
H2afb2S4R1M3 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
H2afb2S4R1M3 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
H2afb2S4R1M3 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
H2afb2S4R1M3 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
H2afb2S4R1M3 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
H2afb2S4R1M3 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
H2afb2S4R1M3 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
H2afb2S4R1M3 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
H2afb2S4R1M3 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
H2afb2S4R1M3 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
H2afb2S4R1M3 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
H2afb2S4R1M3 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
H2afb2S4R1M3 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
H2afb2S4R1M3 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
H2afb2S4R1M3 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
H2afb2S4R1M3 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
H2afb2S4R1M3 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
H2afb2S4R1M3 Gm43579-201ENSMUST00000202387 1307 ntBASIC12.62□□□□□ -0.39
H2afb2S4R1M3 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
H2afb2S4R1M3 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
H2afb2S4R1M3 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
H2afb2S4R1M3 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
H2afb2S4R1M3 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.61□□□□□ -0.39
H2afb2S4R1M3 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
H2afb2S4R1M3 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
H2afb2S4R1M3 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC12.61□□□□□ -0.39
H2afb2S4R1M3 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
H2afb2S4R1M3 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
H2afb2S4R1M3 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.61□□□□□ -0.39
H2afb2S4R1M3 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
H2afb2S4R1M3 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
H2afb2S4R1M3 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
H2afb2S4R1M3 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
H2afb2S4R1M3 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
H2afb2S4R1M3 Gm13492-201ENSMUST00000119772 665 ntBASIC12.61□□□□□ -0.39
H2afb2S4R1M3 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC12.61□□□□□ -0.39
H2afb2S4R1M3 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC12.61□□□□□ -0.39
H2afb2S4R1M3 Gm27731-201ENSMUST00000185192 107 ntBASIC12.61□□□□□ -0.39
H2afb2S4R1M3 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.61□□□□□ -0.39
H2afb2S4R1M3 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
H2afb2S4R1M3 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
H2afb2S4R1M3 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.61□□□□□ -0.39
H2afb2S4R1M3 Gm18584-201ENSMUST00000203098 964 ntBASIC12.61□□□□□ -0.39
H2afb2S4R1M3 AC167013.1-201ENSMUST00000228592 202 ntBASIC12.61□□□□□ -0.39
H2afb2S4R1M3 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
H2afb2S4R1M3 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
H2afb2S4R1M3 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
H2afb2S4R1M3 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
H2afb2S4R1M3 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
H2afb2S4R1M3 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
H2afb2S4R1M3 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.61□□□□□ -0.39
H2afb2S4R1M3 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
H2afb2S4R1M3 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
H2afb2S4R1M3 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
H2afb2S4R1M3 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
H2afb2S4R1M3 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
H2afb2S4R1M3 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
H2afb2S4R1M3 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
H2afb2S4R1M3 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
H2afb2S4R1M3 Gm8793-201ENSMUST00000183069 1303 ntBASIC12.61□□□□□ -0.39
H2afb2S4R1M3 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
H2afb2S4R1M3 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
H2afb2S4R1M3 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
H2afb2S4R1M3 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.61□□□□□ -0.39
H2afb2S4R1M3 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
H2afb2S4R1M3 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
H2afb2S4R1M3 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
H2afb2S4R1M3 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
H2afb2S4R1M3 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
H2afb2S4R1M3 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
H2afb2S4R1M3 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
H2afb2S4R1M3 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
H2afb2S4R1M3 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
H2afb2S4R1M3 Gm15824-201ENSMUST00000119516 955 ntBASIC12.6□□□□□ -0.39
H2afb2S4R1M3 Gm12502-201ENSMUST00000120197 444 ntBASIC12.6□□□□□ -0.39
H2afb2S4R1M3 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.6□□□□□ -0.39
H2afb2S4R1M3 Gm14760-201ENSMUST00000121831 999 ntBASIC12.6□□□□□ -0.39
H2afb2S4R1M3 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC12.6□□□□□ -0.39
H2afb2S4R1M3 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC12.6□□□□□ -0.39
H2afb2S4R1M3 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC12.6□□□□□ -0.39
H2afb2S4R1M3 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
H2afb2S4R1M3 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
H2afb2S4R1M3 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
H2afb2S4R1M3 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
H2afb2S4R1M3 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC12.6□□□□□ -0.39
H2afb2S4R1M3 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC12.6□□□□□ -0.39
H2afb2S4R1M3 AC130829.1-201ENSMUST00000221548 494 ntBASIC12.6□□□□□ -0.39
H2afb2S4R1M3 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms