Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Cldn9Q9Z0S7 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Cldn9Q9Z0S7 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Cldn9Q9Z0S7 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Cldn9Q9Z0S7 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cldn9Q9Z0S7 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.14□□□□□ -0.47
Cldn9Q9Z0S7 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cldn9Q9Z0S7 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cldn9Q9Z0S7 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cldn9Q9Z0S7 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cldn9Q9Z0S7 Gm10339-203ENSMUST00000225409 1671 ntBASIC12.14□□□□□ -0.47
Cldn9Q9Z0S7 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.14□□□□□ -0.47
Cldn9Q9Z0S7 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cldn9Q9Z0S7 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cldn9Q9Z0S7 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cldn9Q9Z0S7 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.14□□□□□ -0.47
Cldn9Q9Z0S7 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cldn9Q9Z0S7 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Cldn9Q9Z0S7 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cldn9Q9Z0S7 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
Cldn9Q9Z0S7 Gm44124-201ENSMUST00000204159 472 ntBASIC12.14□□□□□ -0.47
Cldn9Q9Z0S7 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.14□□□□□ -0.47
Cldn9Q9Z0S7 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cldn9Q9Z0S7 AC140375.2-201ENSMUST00000225283 584 ntBASIC12.14□□□□□ -0.47
Cldn9Q9Z0S7 AC022775.2-201ENSMUST00000227885 646 ntBASIC12.14□□□□□ -0.47
Cldn9Q9Z0S7 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cldn9Q9Z0S7 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cldn9Q9Z0S7 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cldn9Q9Z0S7 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cldn9Q9Z0S7 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Cldn9Q9Z0S7 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Cldn9Q9Z0S7 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.14□□□□□ -0.47
Cldn9Q9Z0S7 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cldn9Q9Z0S7 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cldn9Q9Z0S7 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cldn9Q9Z0S7 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cldn9Q9Z0S7 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Cldn9Q9Z0S7 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
Cldn9Q9Z0S7 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cldn9Q9Z0S7 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cldn9Q9Z0S7 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
Cldn9Q9Z0S7 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.14□□□□□ -0.47
Cldn9Q9Z0S7 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cldn9Q9Z0S7 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cldn9Q9Z0S7 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cldn9Q9Z0S7 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cldn9Q9Z0S7 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cldn9Q9Z0S7 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cldn9Q9Z0S7 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cldn9Q9Z0S7 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cldn9Q9Z0S7 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cldn9Q9Z0S7 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Cldn9Q9Z0S7 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cldn9Q9Z0S7 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cldn9Q9Z0S7 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cldn9Q9Z0S7 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cldn9Q9Z0S7 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.13□□□□□ -0.47
Cldn9Q9Z0S7 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Cldn9Q9Z0S7 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC12.13□□□□□ -0.47
Cldn9Q9Z0S7 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC12.13□□□□□ -0.47
Cldn9Q9Z0S7 Gm12390-201ENSMUST00000117897 397 ntBASIC12.13□□□□□ -0.47
Cldn9Q9Z0S7 Gm14760-201ENSMUST00000121831 999 ntBASIC12.13□□□□□ -0.47
Cldn9Q9Z0S7 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC12.13□□□□□ -0.47
Cldn9Q9Z0S7 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cldn9Q9Z0S7 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC12.13□□□□□ -0.47
Cldn9Q9Z0S7 Tyms-ps-201ENSMUST00000219550 915 ntBASIC12.13□□□□□ -0.47
Cldn9Q9Z0S7 AC132317.1-201ENSMUST00000227227 962 ntBASIC12.13□□□□□ -0.47
Cldn9Q9Z0S7 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC12.13□□□□□ -0.47
Cldn9Q9Z0S7 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cldn9Q9Z0S7 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cldn9Q9Z0S7 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.13□□□□□ -0.47
Cldn9Q9Z0S7 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cldn9Q9Z0S7 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cldn9Q9Z0S7 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cldn9Q9Z0S7 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cldn9Q9Z0S7 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cldn9Q9Z0S7 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.13□□□□□ -0.47
Cldn9Q9Z0S7 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.13□□□□□ -0.47
Cldn9Q9Z0S7 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.13□□□□□ -0.47
Cldn9Q9Z0S7 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cldn9Q9Z0S7 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cldn9Q9Z0S7 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cldn9Q9Z0S7 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cldn9Q9Z0S7 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cldn9Q9Z0S7 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cldn9Q9Z0S7 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.12□□□□□ -0.47
Cldn9Q9Z0S7 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cldn9Q9Z0S7 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC12.12□□□□□ -0.47
Cldn9Q9Z0S7 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC12.12□□□□□ -0.47
Cldn9Q9Z0S7 Gm13492-201ENSMUST00000119772 665 ntBASIC12.12□□□□□ -0.47
Cldn9Q9Z0S7 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.12□□□□□ -0.47
Cldn9Q9Z0S7 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC12.12□□□□□ -0.47
Cldn9Q9Z0S7 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC12.12□□□□□ -0.47
Cldn9Q9Z0S7 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Cldn9Q9Z0S7 Gm17150-201ENSMUST00000165577 381 ntBASIC12.12□□□□□ -0.47
Cldn9Q9Z0S7 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC12.12□□□□□ -0.47
Cldn9Q9Z0S7 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cldn9Q9Z0S7 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Cldn9Q9Z0S7 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC12.12□□□□□ -0.47
Cldn9Q9Z0S7 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms