Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdh17Q9R100 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdh17Q9R100 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cdh17Q9R100 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
Cdh17Q9R100 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC12.3□□□□□ -0.44
Cdh17Q9R100 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdh17Q9R100 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC12.3□□□□□ -0.44
Cdh17Q9R100 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cdh17Q9R100 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC12.3□□□□□ -0.44
Cdh17Q9R100 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Cdh17Q9R100 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Cdh17Q9R100 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdh17Q9R100 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdh17Q9R100 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdh17Q9R100 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Cdh17Q9R100 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Cdh17Q9R100 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdh17Q9R100 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cdh17Q9R100 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdh17Q9R100 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cdh17Q9R100 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdh17Q9R100 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdh17Q9R100 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdh17Q9R100 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cdh17Q9R100 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.29□□□□□ -0.44
Cdh17Q9R100 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.29□□□□□ -0.44
Cdh17Q9R100 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdh17Q9R100 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
Cdh17Q9R100 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cdh17Q9R100 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Cdh17Q9R100 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdh17Q9R100 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cdh17Q9R100 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdh17Q9R100 Gm24231-201ENSMUST00000104315 133 ntBASIC12.29□□□□□ -0.44
Cdh17Q9R100 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC12.29□□□□□ -0.44
Cdh17Q9R100 Gm12384-201ENSMUST00000119228 919 ntBASIC12.29□□□□□ -0.44
Cdh17Q9R100 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC12.29□□□□□ -0.44
Cdh17Q9R100 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.29□□□□□ -0.44
Cdh17Q9R100 Gm22331-201ENSMUST00000158066 136 ntBASIC12.29□□□□□ -0.44
Cdh17Q9R100 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC12.29□□□□□ -0.44
Cdh17Q9R100 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12.29□□□□□ -0.44
Cdh17Q9R100 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12.29□□□□□ -0.44
Cdh17Q9R100 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Cdh17Q9R100 Ighv5-13-201ENSMUST00000193550 290 ntBASIC12.29□□□□□ -0.44
Cdh17Q9R100 Gm38092-201ENSMUST00000195600 653 ntBASIC12.29□□□□□ -0.44
Cdh17Q9R100 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC12.29□□□□□ -0.44
Cdh17Q9R100 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdh17Q9R100 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cdh17Q9R100 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cdh17Q9R100 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Cdh17Q9R100 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cdh17Q9R100 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdh17Q9R100 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdh17Q9R100 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdh17Q9R100 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdh17Q9R100 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdh17Q9R100 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdh17Q9R100 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdh17Q9R100 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Cdh17Q9R100 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.29□□□□□ -0.44
Cdh17Q9R100 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdh17Q9R100 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.29□□□□□ -0.44
Cdh17Q9R100 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Cdh17Q9R100 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdh17Q9R100 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.29□□□□□ -0.44
Cdh17Q9R100 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdh17Q9R100 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cdh17Q9R100 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.29□□□□□ -0.44
Cdh17Q9R100 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdh17Q9R100 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdh17Q9R100 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC12.29□□□□□ -0.44
Cdh17Q9R100 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdh17Q9R100 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdh17Q9R100 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cdh17Q9R100 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdh17Q9R100 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cdh17Q9R100 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cdh17Q9R100 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdh17Q9R100 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
Cdh17Q9R100 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cdh17Q9R100 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.28□□□□□ -0.44
Cdh17Q9R100 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdh17Q9R100 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.28□□□□□ -0.44
Cdh17Q9R100 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cdh17Q9R100 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cdh17Q9R100 Gm7029-201ENSMUST00000173226 450 ntBASIC12.28□□□□□ -0.44
Cdh17Q9R100 Gm45059-201ENSMUST00000205558 1077 ntBASIC12.28□□□□□ -0.44
Cdh17Q9R100 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC12.28□□□□□ -0.44
Cdh17Q9R100 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdh17Q9R100 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdh17Q9R100 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdh17Q9R100 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cdh17Q9R100 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Cdh17Q9R100 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cdh17Q9R100 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Cdh17Q9R100 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cdh17Q9R100 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cdh17Q9R100 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
Cdh17Q9R100 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cdh17Q9R100 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms