Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC12.57□□□□□ -0.4
Tubb3Q9ERD7 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tubb3Q9ERD7 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.57□□□□□ -0.4
Tubb3Q9ERD7 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC12.57□□□□□ -0.4
Tubb3Q9ERD7 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Tubb3Q9ERD7 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Tubb3Q9ERD7 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Tubb3Q9ERD7 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Tubb3Q9ERD7 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tubb3Q9ERD7 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Tubb3Q9ERD7 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tubb3Q9ERD7 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tubb3Q9ERD7 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tubb3Q9ERD7 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Tubb3Q9ERD7 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.57□□□□□ -0.4
Tubb3Q9ERD7 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Tubb3Q9ERD7 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tubb3Q9ERD7 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tubb3Q9ERD7 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tubb3Q9ERD7 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Tubb3Q9ERD7 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tubb3Q9ERD7 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tubb3Q9ERD7 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tubb3Q9ERD7 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tubb3Q9ERD7 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tubb3Q9ERD7 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tubb3Q9ERD7 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tubb3Q9ERD7 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tubb3Q9ERD7 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tubb3Q9ERD7 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tubb3Q9ERD7 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tubb3Q9ERD7 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tubb3Q9ERD7 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tubb3Q9ERD7 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tubb3Q9ERD7 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tubb3Q9ERD7 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tubb3Q9ERD7 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tubb3Q9ERD7 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC12.56□□□□□ -0.4
Tubb3Q9ERD7 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Tubb3Q9ERD7 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Tubb3Q9ERD7 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Tubb3Q9ERD7 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.56□□□□□ -0.4
Tubb3Q9ERD7 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tubb3Q9ERD7 Gm10146-201ENSMUST00000072739 309 ntBASIC12.56□□□□□ -0.4
Tubb3Q9ERD7 Gm10268-201ENSMUST00000085340 555 ntBASIC12.56□□□□□ -0.4
Tubb3Q9ERD7 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tubb3Q9ERD7 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Tubb3Q9ERD7 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tubb3Q9ERD7 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.56□□□□□ -0.4
Tubb3Q9ERD7 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tubb3Q9ERD7 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tubb3Q9ERD7 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tubb3Q9ERD7 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tubb3Q9ERD7 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Tubb3Q9ERD7 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tubb3Q9ERD7 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Tubb3Q9ERD7 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tubb3Q9ERD7 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tubb3Q9ERD7 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tubb3Q9ERD7 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tubb3Q9ERD7 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Tubb3Q9ERD7 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Tubb3Q9ERD7 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Tubb3Q9ERD7 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Tubb3Q9ERD7 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.55□□□□□ -0.4
Tubb3Q9ERD7 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tubb3Q9ERD7 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tubb3Q9ERD7 Gm23931-201ENSMUST00000103842 109 ntBASIC12.55□□□□□ -0.4
Tubb3Q9ERD7 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tubb3Q9ERD7 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC12.55□□□□□ -0.4
Tubb3Q9ERD7 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Tubb3Q9ERD7 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Tubb3Q9ERD7 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tubb3Q9ERD7 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC12.55□□□□□ -0.4
Tubb3Q9ERD7 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC12.55□□□□□ -0.4
Tubb3Q9ERD7 Mir6420-201ENSMUST00000185032 102 ntBASIC12.55□□□□□ -0.4
Tubb3Q9ERD7 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC12.55□□□□□ -0.4
Tubb3Q9ERD7 Gm44069-201ENSMUST00000204898 506 ntBASIC12.55□□□□□ -0.4
Tubb3Q9ERD7 Gm44985-201ENSMUST00000206202 1016 ntBASIC12.55□□□□□ -0.4
Tubb3Q9ERD7 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
Tubb3Q9ERD7 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tubb3Q9ERD7 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tubb3Q9ERD7 Gm8399-201ENSMUST00000082300 1117 ntBASIC12.55□□□□□ -0.4
Tubb3Q9ERD7 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tubb3Q9ERD7 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Tubb3Q9ERD7 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tubb3Q9ERD7 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tubb3Q9ERD7 Paupar-201ENSMUST00000194826 3482 ntBASIC12.55□□□□□ -0.4
Tubb3Q9ERD7 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Tubb3Q9ERD7 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.55□□□□□ -0.4
Tubb3Q9ERD7 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC12.55□□□□□ -0.4
Tubb3Q9ERD7 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tubb3Q9ERD7 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Tubb3Q9ERD7 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tubb3Q9ERD7 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tubb3Q9ERD7 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.55□□□□□ -0.4
Tubb3Q9ERD7 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tubb3Q9ERD7 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tubb3Q9ERD7 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tubb3Q9ERD7 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms