Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx2-4Q9EQM3 Mir6998-201ENSMUST00000183343 64 ntBASIC12.92□□□□□ -0.34
Nkx2-4Q9EQM3 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx2-4Q9EQM3 Ighv4-2-201ENSMUST00000192975 362 ntBASIC12.92□□□□□ -0.34
Nkx2-4Q9EQM3 Gm3793-201ENSMUST00000204973 672 ntBASIC12.92□□□□□ -0.34
Nkx2-4Q9EQM3 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx2-4Q9EQM3 Gm7395-201ENSMUST00000216059 1045 ntBASIC12.92□□□□□ -0.34
Nkx2-4Q9EQM3 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx2-4Q9EQM3 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx2-4Q9EQM3 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx2-4Q9EQM3 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx2-4Q9EQM3 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx2-4Q9EQM3 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx2-4Q9EQM3 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC12.92□□□□□ -0.34
Nkx2-4Q9EQM3 Gm26448-201ENSMUST00000082446 203 ntBASIC12.92□□□□□ -0.34
Nkx2-4Q9EQM3 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx2-4Q9EQM3 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC12.92□□□□□ -0.34
Nkx2-4Q9EQM3 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx2-4Q9EQM3 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC12.92□□□□□ -0.34
Nkx2-4Q9EQM3 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Nkx2-4Q9EQM3 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx2-4Q9EQM3 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC12.92□□□□□ -0.34
Nkx2-4Q9EQM3 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC12.92□□□□□ -0.34
Nkx2-4Q9EQM3 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx2-4Q9EQM3 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx2-4Q9EQM3 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx2-4Q9EQM3 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nkx2-4Q9EQM3 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12.91□□□□□ -0.34
Nkx2-4Q9EQM3 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx2-4Q9EQM3 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx2-4Q9EQM3 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx2-4Q9EQM3 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx2-4Q9EQM3 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx2-4Q9EQM3 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx2-4Q9EQM3 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx2-4Q9EQM3 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.91□□□□□ -0.34
Nkx2-4Q9EQM3 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.91□□□□□ -0.34
Nkx2-4Q9EQM3 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx2-4Q9EQM3 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx2-4Q9EQM3 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.91□□□□□ -0.34
Nkx2-4Q9EQM3 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx2-4Q9EQM3 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx2-4Q9EQM3 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Nkx2-4Q9EQM3 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Nkx2-4Q9EQM3 Gm14314-201ENSMUST00000118225 1015 ntBASIC12.91□□□□□ -0.34
Nkx2-4Q9EQM3 Gm12628-201ENSMUST00000122193 382 ntBASIC12.91□□□□□ -0.34
Nkx2-4Q9EQM3 Gm4726-201ENSMUST00000135604 736 ntBASIC12.91□□□□□ -0.34
Nkx2-4Q9EQM3 Gm6019-201ENSMUST00000148369 736 ntBASIC12.91□□□□□ -0.34
Nkx2-4Q9EQM3 Gm23085-201ENSMUST00000157849 293 ntBASIC12.91□□□□□ -0.34
Nkx2-4Q9EQM3 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx2-4Q9EQM3 Gm27530-201ENSMUST00000184096 98 ntBASIC12.91□□□□□ -0.34
Nkx2-4Q9EQM3 Gm3332-201ENSMUST00000189337 928 ntBASIC12.91□□□□□ -0.34
Nkx2-4Q9EQM3 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC12.91□□□□□ -0.34
Nkx2-4Q9EQM3 Gm19994-201ENSMUST00000217086 586 ntBASIC12.91□□□□□ -0.34
Nkx2-4Q9EQM3 AC156501.1-201ENSMUST00000228219 270 ntBASIC12.91□□□□□ -0.34
Nkx2-4Q9EQM3 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx2-4Q9EQM3 Srp19-201ENSMUST00000072576 876 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx2-4Q9EQM3 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx2-4Q9EQM3 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx2-4Q9EQM3 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx2-4Q9EQM3 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.91□□□□□ -0.34
Nkx2-4Q9EQM3 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx2-4Q9EQM3 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx2-4Q9EQM3 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx2-4Q9EQM3 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx2-4Q9EQM3 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Nkx2-4Q9EQM3 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC12.91□□□□□ -0.34
Nkx2-4Q9EQM3 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx2-4Q9EQM3 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx2-4Q9EQM3 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.91□□□□□ -0.34
Nkx2-4Q9EQM3 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx2-4Q9EQM3 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx2-4Q9EQM3 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nkx2-4Q9EQM3 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
Nkx2-4Q9EQM3 Gm9387-201ENSMUST00000098624 1320 ntBASIC12.9□□□□□ -0.34
Nkx2-4Q9EQM3 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx2-4Q9EQM3 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx2-4Q9EQM3 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.9□□□□□ -0.34
Nkx2-4Q9EQM3 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx2-4Q9EQM3 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx2-4Q9EQM3 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx2-4Q9EQM3 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx2-4Q9EQM3 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx2-4Q9EQM3 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx2-4Q9EQM3 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC12.9□□□□□ -0.34
Nkx2-4Q9EQM3 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx2-4Q9EQM3 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx2-4Q9EQM3 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Nkx2-4Q9EQM3 Rad54b-203ENSMUST00000108306 652 ntTSL 3 BASIC12.9□□□□□ -0.34
Nkx2-4Q9EQM3 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC12.9□□□□□ -0.34
Nkx2-4Q9EQM3 Mir1901-201ENSMUST00000122616 78 ntBASIC12.9□□□□□ -0.34
Nkx2-4Q9EQM3 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx2-4Q9EQM3 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx2-4Q9EQM3 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx2-4Q9EQM3 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx2-4Q9EQM3 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Nkx2-4Q9EQM3 Gm6771-201ENSMUST00000182716 1001 ntBASIC12.9□□□□□ -0.34
Nkx2-4Q9EQM3 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC12.9□□□□□ -0.34
Nkx2-4Q9EQM3 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC12.9□□□□□ -0.34
Nkx2-4Q9EQM3 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 69.4 ms