Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
Chmp2aQ9DB34 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp2aQ9DB34 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp2aQ9DB34 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp2aQ9DB34 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp2aQ9DB34 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp2aQ9DB34 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp2aQ9DB34 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC13.19□□□□□ -0.3
Chmp2aQ9DB34 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp2aQ9DB34 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp2aQ9DB34 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp2aQ9DB34 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
Chmp2aQ9DB34 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp2aQ9DB34 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp2aQ9DB34 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp2aQ9DB34 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp2aQ9DB34 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp2aQ9DB34 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp2aQ9DB34 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Chmp2aQ9DB34 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp2aQ9DB34 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp2aQ9DB34 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp2aQ9DB34 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp2aQ9DB34 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp2aQ9DB34 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp2aQ9DB34 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp2aQ9DB34 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp2aQ9DB34 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp2aQ9DB34 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp2aQ9DB34 Gm5638-201ENSMUST00000118618 1258 ntBASIC13.18□□□□□ -0.3
Chmp2aQ9DB34 Gm12329-201ENSMUST00000120829 1007 ntBASIC13.18□□□□□ -0.3
Chmp2aQ9DB34 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC13.18□□□□□ -0.3
Chmp2aQ9DB34 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp2aQ9DB34 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp2aQ9DB34 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
Chmp2aQ9DB34 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC13.18□□□□□ -0.3
Chmp2aQ9DB34 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC13.18□□□□□ -0.3
Chmp2aQ9DB34 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Chmp2aQ9DB34 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC13.18□□□□□ -0.3
Chmp2aQ9DB34 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Chmp2aQ9DB34 Gm43438-201ENSMUST00000198133 379 ntBASIC13.18□□□□□ -0.3
Chmp2aQ9DB34 Gm17823-201ENSMUST00000217830 1006 ntBASIC13.18□□□□□ -0.3
Chmp2aQ9DB34 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp2aQ9DB34 Gm3052-202ENSMUST00000188254 2224 ntBASIC13.18□□□□□ -0.3
Chmp2aQ9DB34 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp2aQ9DB34 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp2aQ9DB34 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Chmp2aQ9DB34 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC13.18□□□□□ -0.3
Chmp2aQ9DB34 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Chmp2aQ9DB34 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC13.18□□□□□ -0.3
Chmp2aQ9DB34 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC13.18□□□□□ -0.3
Chmp2aQ9DB34 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp2aQ9DB34 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Chmp2aQ9DB34 Gm43045-201ENSMUST00000198725 2095 ntBASIC13.17□□□□□ -0.3
Chmp2aQ9DB34 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC13.17□□□□□ -0.3
Chmp2aQ9DB34 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Chmp2aQ9DB34 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chmp2aQ9DB34 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Chmp2aQ9DB34 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Chmp2aQ9DB34 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chmp2aQ9DB34 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chmp2aQ9DB34 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Chmp2aQ9DB34 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chmp2aQ9DB34 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Chmp2aQ9DB34 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chmp2aQ9DB34 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chmp2aQ9DB34 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Chmp2aQ9DB34 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chmp2aQ9DB34 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chmp2aQ9DB34 Gm43133-201ENSMUST00000197472 463 ntBASIC13.17□□□□□ -0.3
Chmp2aQ9DB34 AC093022.5-201ENSMUST00000226841 1079 ntBASIC13.17□□□□□ -0.3
Chmp2aQ9DB34 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chmp2aQ9DB34 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chmp2aQ9DB34 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Chmp2aQ9DB34 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chmp2aQ9DB34 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Chmp2aQ9DB34 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chmp2aQ9DB34 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chmp2aQ9DB34 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chmp2aQ9DB34 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chmp2aQ9DB34 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Chmp2aQ9DB34 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Chmp2aQ9DB34 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chmp2aQ9DB34 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chmp2aQ9DB34 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC13.16□□□□□ -0.3
Chmp2aQ9DB34 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Chmp2aQ9DB34 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Chmp2aQ9DB34 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chmp2aQ9DB34 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chmp2aQ9DB34 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chmp2aQ9DB34 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chmp2aQ9DB34 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Chmp2aQ9DB34 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chmp2aQ9DB34 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chmp2aQ9DB34 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chmp2aQ9DB34 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chmp2aQ9DB34 Gm8228-201ENSMUST00000189949 2192 ntBASIC13.16□□□□□ -0.3
Chmp2aQ9DB34 AC241621.2-201ENSMUST00000223991 2151 ntBASIC13.16□□□□□ -0.3
Chmp2aQ9DB34 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chmp2aQ9DB34 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms