Protein–RNA interactions for Protein: Q9DA21

Smco2, Single-pass membrane and coiled-coil domain-containing protein 2, mousemouse

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco2Q9DA21 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smco2Q9DA21 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smco2Q9DA21 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smco2Q9DA21 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Smco2Q9DA21 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smco2Q9DA21 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Smco2Q9DA21 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smco2Q9DA21 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smco2Q9DA21 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smco2Q9DA21 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Smco2Q9DA21 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smco2Q9DA21 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Smco2Q9DA21 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC14.25□□□□□ -0.13
Smco2Q9DA21 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Smco2Q9DA21 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Smco2Q9DA21 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smco2Q9DA21 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smco2Q9DA21 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Smco2Q9DA21 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC14.25□□□□□ -0.13
Smco2Q9DA21 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC14.25□□□□□ -0.13
Smco2Q9DA21 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smco2Q9DA21 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Smco2Q9DA21 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smco2Q9DA21 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smco2Q9DA21 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Smco2Q9DA21 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC14.25□□□□□ -0.13
Smco2Q9DA21 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Smco2Q9DA21 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smco2Q9DA21 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC14.25□□□□□ -0.13
Smco2Q9DA21 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smco2Q9DA21 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC14.24□□□□□ -0.13
Smco2Q9DA21 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Smco2Q9DA21 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smco2Q9DA21 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smco2Q9DA21 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smco2Q9DA21 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Smco2Q9DA21 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Smco2Q9DA21 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smco2Q9DA21 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Smco2Q9DA21 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Smco2Q9DA21 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC14.24□□□□□ -0.13
Smco2Q9DA21 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Smco2Q9DA21 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
Smco2Q9DA21 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smco2Q9DA21 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Smco2Q9DA21 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smco2Q9DA21 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smco2Q9DA21 Mir877-201ENSMUST00000104738 85 ntBASIC14.24□□□□□ -0.13
Smco2Q9DA21 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Smco2Q9DA21 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC14.24□□□□□ -0.13
Smco2Q9DA21 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC14.24□□□□□ -0.13
Smco2Q9DA21 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
Smco2Q9DA21 Gm20482-202ENSMUST00000174729 825 ntBASIC14.24□□□□□ -0.13
Smco2Q9DA21 Gm23363-201ENSMUST00000175024 79 ntBASIC14.24□□□□□ -0.13
Smco2Q9DA21 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Smco2Q9DA21 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Smco2Q9DA21 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Smco2Q9DA21 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Smco2Q9DA21 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smco2Q9DA21 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smco2Q9DA21 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Smco2Q9DA21 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smco2Q9DA21 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smco2Q9DA21 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Smco2Q9DA21 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smco2Q9DA21 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smco2Q9DA21 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smco2Q9DA21 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smco2Q9DA21 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smco2Q9DA21 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smco2Q9DA21 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smco2Q9DA21 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smco2Q9DA21 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smco2Q9DA21 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Smco2Q9DA21 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC14.24□□□□□ -0.13
Smco2Q9DA21 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Smco2Q9DA21 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smco2Q9DA21 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC14.23□□□□□ -0.13
Smco2Q9DA21 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smco2Q9DA21 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smco2Q9DA21 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Smco2Q9DA21 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Smco2Q9DA21 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smco2Q9DA21 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smco2Q9DA21 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smco2Q9DA21 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smco2Q9DA21 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Smco2Q9DA21 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smco2Q9DA21 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smco2Q9DA21 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smco2Q9DA21 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Smco2Q9DA21 Gm43463-201ENSMUST00000195967 1803 ntBASIC14.23□□□□□ -0.13
Smco2Q9DA21 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smco2Q9DA21 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Smco2Q9DA21 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Smco2Q9DA21 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Smco2Q9DA21 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smco2Q9DA21 Gm15236-201ENSMUST00000117309 379 ntBASIC14.23□□□□□ -0.13
Smco2Q9DA21 Gm12291-201ENSMUST00000121627 311 ntBASIC14.23□□□□□ -0.13
Smco2Q9DA21 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 117.5 ms