Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim42Q9D2H5 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
Trim42Q9D2H5 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trim42Q9D2H5 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim42Q9D2H5 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim42Q9D2H5 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim42Q9D2H5 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trim42Q9D2H5 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim42Q9D2H5 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim42Q9D2H5 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trim42Q9D2H5 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trim42Q9D2H5 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trim42Q9D2H5 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
Trim42Q9D2H5 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim42Q9D2H5 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim42Q9D2H5 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim42Q9D2H5 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim42Q9D2H5 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim42Q9D2H5 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Trim42Q9D2H5 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim42Q9D2H5 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trim42Q9D2H5 Gm1995-201ENSMUST00000220838 2602 ntBASIC12.69□□□□□ -0.38
Trim42Q9D2H5 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC12.69□□□□□ -0.38
Trim42Q9D2H5 Gm38116-201ENSMUST00000193873 1533 ntBASIC12.69□□□□□ -0.38
Trim42Q9D2H5 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim42Q9D2H5 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim42Q9D2H5 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Trim42Q9D2H5 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Trim42Q9D2H5 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim42Q9D2H5 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim42Q9D2H5 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trim42Q9D2H5 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trim42Q9D2H5 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim42Q9D2H5 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim42Q9D2H5 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim42Q9D2H5 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC12.69□□□□□ -0.38
Trim42Q9D2H5 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim42Q9D2H5 Gm11400-201ENSMUST00000120853 1214 ntBASIC12.69□□□□□ -0.38
Trim42Q9D2H5 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim42Q9D2H5 Cd63-ps-201ENSMUST00000145417 875 ntBASIC12.69□□□□□ -0.38
Trim42Q9D2H5 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC12.69□□□□□ -0.38
Trim42Q9D2H5 Gm27430-201ENSMUST00000184585 107 ntBASIC12.69□□□□□ -0.38
Trim42Q9D2H5 Gm44333-201ENSMUST00000197168 107 ntBASIC12.69□□□□□ -0.38
Trim42Q9D2H5 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC12.69□□□□□ -0.38
Trim42Q9D2H5 Gm7390-201ENSMUST00000212452 1216 ntBASIC12.69□□□□□ -0.38
Trim42Q9D2H5 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim42Q9D2H5 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim42Q9D2H5 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim42Q9D2H5 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim42Q9D2H5 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim42Q9D2H5 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim42Q9D2H5 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Trim42Q9D2H5 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
Trim42Q9D2H5 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim42Q9D2H5 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim42Q9D2H5 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim42Q9D2H5 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim42Q9D2H5 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim42Q9D2H5 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trim42Q9D2H5 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trim42Q9D2H5 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trim42Q9D2H5 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim42Q9D2H5 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trim42Q9D2H5 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim42Q9D2H5 Gm37849-201ENSMUST00000194722 1881 ntBASIC12.68□□□□□ -0.38
Trim42Q9D2H5 Gm43075-201ENSMUST00000198613 3905 ntBASIC12.68□□□□□ -0.38
Trim42Q9D2H5 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim42Q9D2H5 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim42Q9D2H5 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim42Q9D2H5 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trim42Q9D2H5 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim42Q9D2H5 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trim42Q9D2H5 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim42Q9D2H5 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim42Q9D2H5 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim42Q9D2H5 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim42Q9D2H5 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Trim42Q9D2H5 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC12.68□□□□□ -0.38
Trim42Q9D2H5 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC12.68□□□□□ -0.38
Trim42Q9D2H5 Gm19184-201ENSMUST00000196798 928 ntBASIC12.68□□□□□ -0.38
Trim42Q9D2H5 Gm42660-201ENSMUST00000197733 947 ntBASIC12.68□□□□□ -0.38
Trim42Q9D2H5 Gm5312-201ENSMUST00000203728 547 ntBASIC12.68□□□□□ -0.38
Trim42Q9D2H5 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC12.68□□□□□ -0.38
Trim42Q9D2H5 Gm8396-201ENSMUST00000057361 823 ntBASIC12.68□□□□□ -0.38
Trim42Q9D2H5 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim42Q9D2H5 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim42Q9D2H5 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Trim42Q9D2H5 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trim42Q9D2H5 Gm6211-201ENSMUST00000147973 4275 ntBASIC12.68□□□□□ -0.38
Trim42Q9D2H5 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trim42Q9D2H5 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Trim42Q9D2H5 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Trim42Q9D2H5 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Trim42Q9D2H5 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC12.68□□□□□ -0.38
Trim42Q9D2H5 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim42Q9D2H5 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trim42Q9D2H5 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim42Q9D2H5 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trim42Q9D2H5 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim42Q9D2H5 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 71.2 ms