Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Upk1aQ9D132 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Upk1aQ9D132 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Upk1aQ9D132 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Upk1aQ9D132 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC11.95□□□□□ -0.5
Upk1aQ9D132 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Upk1aQ9D132 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Upk1aQ9D132 AC164426.2-201ENSMUST00000225993 2492 ntBASIC11.95□□□□□ -0.5
Upk1aQ9D132 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Upk1aQ9D132 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Upk1aQ9D132 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Upk1aQ9D132 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Upk1aQ9D132 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Upk1aQ9D132 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Upk1aQ9D132 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Upk1aQ9D132 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Upk1aQ9D132 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Upk1aQ9D132 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Upk1aQ9D132 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Upk1aQ9D132 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC11.94□□□□□ -0.5
Upk1aQ9D132 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC11.94□□□□□ -0.5
Upk1aQ9D132 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Upk1aQ9D132 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Upk1aQ9D132 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Upk1aQ9D132 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC11.94□□□□□ -0.5
Upk1aQ9D132 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC11.94□□□□□ -0.5
Upk1aQ9D132 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC11.94□□□□□ -0.5
Upk1aQ9D132 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Upk1aQ9D132 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Upk1aQ9D132 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Upk1aQ9D132 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC11.94□□□□□ -0.5
Upk1aQ9D132 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC11.94□□□□□ -0.5
Upk1aQ9D132 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC11.94□□□□□ -0.5
Upk1aQ9D132 Gm18624-201ENSMUST00000220966 658 ntBASIC11.94□□□□□ -0.5
Upk1aQ9D132 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Upk1aQ9D132 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Upk1aQ9D132 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Upk1aQ9D132 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Upk1aQ9D132 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Upk1aQ9D132 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Upk1aQ9D132 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Upk1aQ9D132 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Upk1aQ9D132 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Upk1aQ9D132 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Upk1aQ9D132 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Upk1aQ9D132 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
Upk1aQ9D132 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
Upk1aQ9D132 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC11.94□□□□□ -0.5
Upk1aQ9D132 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Upk1aQ9D132 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Upk1aQ9D132 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Upk1aQ9D132 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Upk1aQ9D132 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC11.94□□□□□ -0.5
Upk1aQ9D132 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Upk1aQ9D132 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Upk1aQ9D132 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Upk1aQ9D132 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Upk1aQ9D132 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Upk1aQ9D132 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC11.93□□□□□ -0.5
Upk1aQ9D132 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Upk1aQ9D132 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Upk1aQ9D132 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Upk1aQ9D132 Gm37513-201ENSMUST00000194830 2268 ntBASIC11.93□□□□□ -0.5
Upk1aQ9D132 Gm38378-201ENSMUST00000195153 2268 ntBASIC11.93□□□□□ -0.5
Upk1aQ9D132 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Upk1aQ9D132 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Upk1aQ9D132 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Upk1aQ9D132 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Upk1aQ9D132 Gm14704-201ENSMUST00000120300 874 ntBASIC11.93□□□□□ -0.5
Upk1aQ9D132 Gm12539-201ENSMUST00000121549 1098 ntBASIC11.93□□□□□ -0.5
Upk1aQ9D132 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC11.93□□□□□ -0.5
Upk1aQ9D132 Gm15429-201ENSMUST00000151268 798 ntBASIC11.93□□□□□ -0.5
Upk1aQ9D132 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC11.93□□□□□ -0.5
Upk1aQ9D132 Mir6392-201ENSMUST00000184924 108 ntBASIC11.93□□□□□ -0.5
Upk1aQ9D132 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Upk1aQ9D132 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC11.93□□□□□ -0.5
Upk1aQ9D132 AC154687.2-201ENSMUST00000223853 640 ntBASIC11.93□□□□□ -0.5
Upk1aQ9D132 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Upk1aQ9D132 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Upk1aQ9D132 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Upk1aQ9D132 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Upk1aQ9D132 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Upk1aQ9D132 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Upk1aQ9D132 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Upk1aQ9D132 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Upk1aQ9D132 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Upk1aQ9D132 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Upk1aQ9D132 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Upk1aQ9D132 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Upk1aQ9D132 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Upk1aQ9D132 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Upk1aQ9D132 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Upk1aQ9D132 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Upk1aQ9D132 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Upk1aQ9D132 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Upk1aQ9D132 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Upk1aQ9D132 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Upk1aQ9D132 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Upk1aQ9D132 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Upk1aQ9D132 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 74.6 ms