Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chaf1bQ9D0N7 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chaf1bQ9D0N7 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chaf1bQ9D0N7 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chaf1bQ9D0N7 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Chaf1bQ9D0N7 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Chaf1bQ9D0N7 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Chaf1bQ9D0N7 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC11.87□□□□□ -0.51
Chaf1bQ9D0N7 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Chaf1bQ9D0N7 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chaf1bQ9D0N7 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chaf1bQ9D0N7 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chaf1bQ9D0N7 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Chaf1bQ9D0N7 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chaf1bQ9D0N7 AC156031.2-201ENSMUST00000213107 3310 ntBASIC11.86□□□□□ -0.51
Chaf1bQ9D0N7 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC11.86□□□□□ -0.51
Chaf1bQ9D0N7 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Chaf1bQ9D0N7 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chaf1bQ9D0N7 AC166574.4-201ENSMUST00000227165 1937 ntBASIC11.86□□□□□ -0.51
Chaf1bQ9D0N7 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chaf1bQ9D0N7 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chaf1bQ9D0N7 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chaf1bQ9D0N7 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Chaf1bQ9D0N7 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chaf1bQ9D0N7 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chaf1bQ9D0N7 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chaf1bQ9D0N7 Mir686-201ENSMUST00000102174 109 ntBASIC11.86□□□□□ -0.51
Chaf1bQ9D0N7 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chaf1bQ9D0N7 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC11.86□□□□□ -0.51
Chaf1bQ9D0N7 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Chaf1bQ9D0N7 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Chaf1bQ9D0N7 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC11.86□□□□□ -0.51
Chaf1bQ9D0N7 AC135669.1-202ENSMUST00000216742 540 ntBASIC11.86□□□□□ -0.51
Chaf1bQ9D0N7 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC11.86□□□□□ -0.51
Chaf1bQ9D0N7 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chaf1bQ9D0N7 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chaf1bQ9D0N7 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Chaf1bQ9D0N7 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC11.86□□□□□ -0.51
Chaf1bQ9D0N7 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC11.86□□□□□ -0.51
Chaf1bQ9D0N7 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC11.86□□□□□ -0.51
Chaf1bQ9D0N7 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Chaf1bQ9D0N7 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
Chaf1bQ9D0N7 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chaf1bQ9D0N7 Gm43365-201ENSMUST00000196522 2106 ntBASIC11.86□□□□□ -0.51
Chaf1bQ9D0N7 Gm5780-201ENSMUST00000217774 1834 ntBASIC11.86□□□□□ -0.51
Chaf1bQ9D0N7 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chaf1bQ9D0N7 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Chaf1bQ9D0N7 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Chaf1bQ9D0N7 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Chaf1bQ9D0N7 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chaf1bQ9D0N7 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chaf1bQ9D0N7 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chaf1bQ9D0N7 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC11.85□□□□□ -0.51
Chaf1bQ9D0N7 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chaf1bQ9D0N7 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chaf1bQ9D0N7 Gm5053-201ENSMUST00000208361 1678 ntBASIC11.85□□□□□ -0.51
Chaf1bQ9D0N7 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Chaf1bQ9D0N7 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Chaf1bQ9D0N7 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chaf1bQ9D0N7 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chaf1bQ9D0N7 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chaf1bQ9D0N7 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chaf1bQ9D0N7 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chaf1bQ9D0N7 Gm11978-201ENSMUST00000122315 466 ntBASIC11.85□□□□□ -0.51
Chaf1bQ9D0N7 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC11.85□□□□□ -0.51
Chaf1bQ9D0N7 Gm37171-201ENSMUST00000192636 1185 ntBASIC11.85□□□□□ -0.51
Chaf1bQ9D0N7 Gm18916-201ENSMUST00000198264 1246 ntBASIC11.85□□□□□ -0.51
Chaf1bQ9D0N7 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Chaf1bQ9D0N7 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC11.85□□□□□ -0.51
Chaf1bQ9D0N7 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chaf1bQ9D0N7 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC11.85□□□□□ -0.51
Chaf1bQ9D0N7 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chaf1bQ9D0N7 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Chaf1bQ9D0N7 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Chaf1bQ9D0N7 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC11.85□□□□□ -0.51
Chaf1bQ9D0N7 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chaf1bQ9D0N7 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chaf1bQ9D0N7 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chaf1bQ9D0N7 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chaf1bQ9D0N7 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Chaf1bQ9D0N7 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chaf1bQ9D0N7 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Chaf1bQ9D0N7 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chaf1bQ9D0N7 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chaf1bQ9D0N7 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chaf1bQ9D0N7 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Chaf1bQ9D0N7 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Chaf1bQ9D0N7 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chaf1bQ9D0N7 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Chaf1bQ9D0N7 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chaf1bQ9D0N7 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Chaf1bQ9D0N7 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC11.84□□□□□ -0.51
Chaf1bQ9D0N7 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Chaf1bQ9D0N7 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chaf1bQ9D0N7 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chaf1bQ9D0N7 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chaf1bQ9D0N7 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chaf1bQ9D0N7 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Chaf1bQ9D0N7 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Chaf1bQ9D0N7 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 9.8 ms