Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC11.69□□□□□ -0.54
Trim13Q9CYB0 Gm44124-201ENSMUST00000204159 472 ntBASIC11.69□□□□□ -0.54
Trim13Q9CYB0 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim13Q9CYB0 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim13Q9CYB0 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC11.69□□□□□ -0.54
Trim13Q9CYB0 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim13Q9CYB0 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim13Q9CYB0 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim13Q9CYB0 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC11.69□□□□□ -0.54
Trim13Q9CYB0 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trim13Q9CYB0 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim13Q9CYB0 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim13Q9CYB0 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim13Q9CYB0 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim13Q9CYB0 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim13Q9CYB0 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim13Q9CYB0 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim13Q9CYB0 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim13Q9CYB0 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim13Q9CYB0 Gm43051-201ENSMUST00000201096 2678 ntBASIC11.68□□□□□ -0.54
Trim13Q9CYB0 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim13Q9CYB0 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim13Q9CYB0 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Trim13Q9CYB0 Gm11978-201ENSMUST00000122315 466 ntBASIC11.68□□□□□ -0.54
Trim13Q9CYB0 4930412F09Rik-201ENSMUST00000139006 1017 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trim13Q9CYB0 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Trim13Q9CYB0 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC11.68□□□□□ -0.54
Trim13Q9CYB0 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trim13Q9CYB0 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim13Q9CYB0 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trim13Q9CYB0 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim13Q9CYB0 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim13Q9CYB0 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Trim13Q9CYB0 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim13Q9CYB0 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trim13Q9CYB0 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim13Q9CYB0 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim13Q9CYB0 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim13Q9CYB0 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC11.68□□□□□ -0.54
Trim13Q9CYB0 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trim13Q9CYB0 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim13Q9CYB0 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trim13Q9CYB0 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Trim13Q9CYB0 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim13Q9CYB0 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC11.67□□□□□ -0.54
Trim13Q9CYB0 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim13Q9CYB0 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Trim13Q9CYB0 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Trim13Q9CYB0 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trim13Q9CYB0 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim13Q9CYB0 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Trim13Q9CYB0 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trim13Q9CYB0 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim13Q9CYB0 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim13Q9CYB0 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim13Q9CYB0 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC11.67□□□□□ -0.54
Trim13Q9CYB0 Gm14057-201ENSMUST00000120631 482 ntBASIC11.67□□□□□ -0.54
Trim13Q9CYB0 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC11.67□□□□□ -0.54
Trim13Q9CYB0 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC11.67□□□□□ -0.54
Trim13Q9CYB0 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC11.67□□□□□ -0.54
Trim13Q9CYB0 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC11.67□□□□□ -0.54
Trim13Q9CYB0 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trim13Q9CYB0 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC11.67□□□□□ -0.54
Trim13Q9CYB0 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC11.67□□□□□ -0.54
Trim13Q9CYB0 AC173210.1-201ENSMUST00000222341 1131 ntBASIC11.67□□□□□ -0.54
Trim13Q9CYB0 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim13Q9CYB0 Gm9797-201ENSMUST00000052902 613 ntBASIC11.67□□□□□ -0.54
Trim13Q9CYB0 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim13Q9CYB0 Gm20445-201ENSMUST00000061905 565 ntBASIC11.67□□□□□ -0.54
Trim13Q9CYB0 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trim13Q9CYB0 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trim13Q9CYB0 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trim13Q9CYB0 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC11.67□□□□□ -0.54
Trim13Q9CYB0 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim13Q9CYB0 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim13Q9CYB0 Gm45053-201ENSMUST00000206112 2499 ntBASIC11.67□□□□□ -0.54
Trim13Q9CYB0 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim13Q9CYB0 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim13Q9CYB0 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim13Q9CYB0 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim13Q9CYB0 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim13Q9CYB0 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trim13Q9CYB0 Cog3-203ENSMUST00000227473 4197 ntBASIC11.67□□□□□ -0.54
Trim13Q9CYB0 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
Trim13Q9CYB0 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trim13Q9CYB0 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trim13Q9CYB0 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim13Q9CYB0 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim13Q9CYB0 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC11.66□□□□□ -0.54
Trim13Q9CYB0 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim13Q9CYB0 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim13Q9CYB0 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Trim13Q9CYB0 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim13Q9CYB0 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trim13Q9CYB0 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim13Q9CYB0 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim13Q9CYB0 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim13Q9CYB0 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trim13Q9CYB0 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Trim13Q9CYB0 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms