Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.52□□□□□ -0.4
Ssu72Q9CY97 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
Ssu72Q9CY97 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ssu72Q9CY97 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Ssu72Q9CY97 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Ssu72Q9CY97 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
Ssu72Q9CY97 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ssu72Q9CY97 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ssu72Q9CY97 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Ssu72Q9CY97 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ssu72Q9CY97 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ssu72Q9CY97 Gm11618-201ENSMUST00000117946 267 ntBASIC12.52□□□□□ -0.41
Ssu72Q9CY97 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Ssu72Q9CY97 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
Ssu72Q9CY97 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC12.52□□□□□ -0.41
Ssu72Q9CY97 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC12.52□□□□□ -0.41
Ssu72Q9CY97 Gm15429-201ENSMUST00000151268 798 ntBASIC12.52□□□□□ -0.41
Ssu72Q9CY97 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Ssu72Q9CY97 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ssu72Q9CY97 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.52□□□□□ -0.41
Ssu72Q9CY97 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC12.52□□□□□ -0.41
Ssu72Q9CY97 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ssu72Q9CY97 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC12.52□□□□□ -0.41
Ssu72Q9CY97 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ssu72Q9CY97 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ssu72Q9CY97 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ssu72Q9CY97 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ssu72Q9CY97 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ssu72Q9CY97 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ssu72Q9CY97 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC12.52□□□□□ -0.41
Ssu72Q9CY97 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC12.52□□□□□ -0.41
Ssu72Q9CY97 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC12.52□□□□□ -0.41
Ssu72Q9CY97 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
Ssu72Q9CY97 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ssu72Q9CY97 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ssu72Q9CY97 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ssu72Q9CY97 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ssu72Q9CY97 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ssu72Q9CY97 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ssu72Q9CY97 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ssu72Q9CY97 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ssu72Q9CY97 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ssu72Q9CY97 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ssu72Q9CY97 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ssu72Q9CY97 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ssu72Q9CY97 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ssu72Q9CY97 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ssu72Q9CY97 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
Ssu72Q9CY97 Gm18983-201ENSMUST00000222884 2729 ntBASIC12.51□□□□□ -0.41
Ssu72Q9CY97 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ssu72Q9CY97 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Ssu72Q9CY97 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ssu72Q9CY97 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ssu72Q9CY97 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ssu72Q9CY97 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ssu72Q9CY97 AC154639.1-201ENSMUST00000224393 2849 ntBASIC12.51□□□□□ -0.41
Ssu72Q9CY97 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ssu72Q9CY97 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ssu72Q9CY97 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ssu72Q9CY97 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ssu72Q9CY97 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ssu72Q9CY97 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC12.51□□□□□ -0.41
Ssu72Q9CY97 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.51□□□□□ -0.41
Ssu72Q9CY97 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
Ssu72Q9CY97 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ssu72Q9CY97 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC12.51□□□□□ -0.41
Ssu72Q9CY97 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC12.51□□□□□ -0.41
Ssu72Q9CY97 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.51□□□□□ -0.41
Ssu72Q9CY97 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ssu72Q9CY97 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ssu72Q9CY97 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ssu72Q9CY97 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ssu72Q9CY97 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ssu72Q9CY97 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ssu72Q9CY97 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.51□□□□□ -0.41
Ssu72Q9CY97 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ssu72Q9CY97 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ssu72Q9CY97 Gm9361-201ENSMUST00000198695 1507 ntBASIC12.51□□□□□ -0.41
Ssu72Q9CY97 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ssu72Q9CY97 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ssu72Q9CY97 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ssu72Q9CY97 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.51□□□□□ -0.41
Ssu72Q9CY97 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ssu72Q9CY97 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Ssu72Q9CY97 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ssu72Q9CY97 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ssu72Q9CY97 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ssu72Q9CY97 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ssu72Q9CY97 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ssu72Q9CY97 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ssu72Q9CY97 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ssu72Q9CY97 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ssu72Q9CY97 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Ssu72Q9CY97 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ssu72Q9CY97 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Ssu72Q9CY97 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Ssu72Q9CY97 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Ssu72Q9CY97 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ssu72Q9CY97 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ssu72Q9CY97 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms