Protein–RNA interactions for Protein: Q99MV7

Rnf17, RING finger protein 17, mousemouse

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf17Q99MV7 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf17Q99MV7 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf17Q99MV7 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Rnf17Q99MV7 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Rnf17Q99MV7 Gm43807-201ENSMUST00000200678 1781 ntBASIC18.16■□□□□ 0.5
Rnf17Q99MV7 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf17Q99MV7 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Rnf17Q99MV7 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf17Q99MV7 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf17Q99MV7 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf17Q99MV7 Etv1-205ENSMUST00000160856 1474 ntTSL 5 BASIC18.16■□□□□ 0.5
Rnf17Q99MV7 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf17Q99MV7 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf17Q99MV7 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf17Q99MV7 Ly6e-207ENSMUST00000187606 735 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Rnf17Q99MV7 Gm23680-201ENSMUST00000083162 164 ntBASIC18.16■□□□□ 0.5
Rnf17Q99MV7 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC18.16■□□□□ 0.5
Rnf17Q99MV7 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf17Q99MV7 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf17Q99MV7 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf17Q99MV7 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf17Q99MV7 Gm6903-201ENSMUST00000160509 1366 ntBASIC18.15■□□□□ 0.5
Rnf17Q99MV7 CT009489.1-201ENSMUST00000227740 1893 ntBASIC18.15■□□□□ 0.5
Rnf17Q99MV7 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf17Q99MV7 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf17Q99MV7 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf17Q99MV7 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf17Q99MV7 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf17Q99MV7 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf17Q99MV7 Gm14193-201ENSMUST00000105067 153 ntBASIC18.15■□□□□ 0.5
Rnf17Q99MV7 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Rnf17Q99MV7 Gm15003-201ENSMUST00000118884 446 ntBASIC18.15■□□□□ 0.5
Rnf17Q99MV7 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC18.15■□□□□ 0.5
Rnf17Q99MV7 Gm45410-201ENSMUST00000211331 1093 ntBASIC18.15■□□□□ 0.5
Rnf17Q99MV7 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC18.15■□□□□ 0.5
Rnf17Q99MV7 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC18.15■□□□□ 0.5
Rnf17Q99MV7 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Rnf17Q99MV7 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Rnf17Q99MV7 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf17Q99MV7 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf17Q99MV7 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC18.15■□□□□ 0.5
Rnf17Q99MV7 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf17Q99MV7 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC18.14■□□□□ 0.5
Rnf17Q99MV7 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Rnf17Q99MV7 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
Rnf17Q99MV7 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Rnf17Q99MV7 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Rnf17Q99MV7 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rnf17Q99MV7 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Rnf17Q99MV7 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Rnf17Q99MV7 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rnf17Q99MV7 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rnf17Q99MV7 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rnf17Q99MV7 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rnf17Q99MV7 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rnf17Q99MV7 Rpl10-ps1-201ENSMUST00000119438 645 ntBASIC18.14■□□□□ 0.49
Rnf17Q99MV7 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC18.14■□□□□ 0.49
Rnf17Q99MV7 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Rnf17Q99MV7 1700086D15Rik-201ENSMUST00000020855 1092 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Rnf17Q99MV7 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC18.14■□□□□ 0.49
Rnf17Q99MV7 Retnla-201ENSMUST00000023329 598 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rnf17Q99MV7 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC18.14■□□□□ 0.49
Rnf17Q99MV7 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rnf17Q99MV7 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC18.14■□□□□ 0.49
Rnf17Q99MV7 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rnf17Q99MV7 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rnf17Q99MV7 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rnf17Q99MV7 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rnf17Q99MV7 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf17Q99MV7 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf17Q99MV7 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf17Q99MV7 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf17Q99MV7 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
Rnf17Q99MV7 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf17Q99MV7 Gm44056-201ENSMUST00000204623 1427 ntBASIC18.13■□□□□ 0.49
Rnf17Q99MV7 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf17Q99MV7 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf17Q99MV7 Gm25766-201ENSMUST00000104101 131 ntBASIC18.13■□□□□ 0.49
Rnf17Q99MV7 Gm23912-201ENSMUST00000104687 87 ntBASIC18.13■□□□□ 0.49
Rnf17Q99MV7 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf17Q99MV7 Gm24398-201ENSMUST00000157870 109 ntBASIC18.13■□□□□ 0.49
Rnf17Q99MV7 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf17Q99MV7 Ftl1-204ENSMUST00000210864 503 ntTSL 5 BASIC18.13■□□□□ 0.49
Rnf17Q99MV7 Gm40761-201ENSMUST00000219123 1153 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf17Q99MV7 Gpr137b-ps-202ENSMUST00000220647 1159 ntBASIC18.13■□□□□ 0.49
Rnf17Q99MV7 Gm18968-201ENSMUST00000221319 862 ntBASIC18.13■□□□□ 0.49
Rnf17Q99MV7 AC129308.3-201ENSMUST00000225652 524 ntBASIC18.13■□□□□ 0.49
Rnf17Q99MV7 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Rnf17Q99MV7 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf17Q99MV7 Pex3-207ENSMUST00000170376 1381 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf17Q99MV7 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC18.13■□□□□ 0.49
Rnf17Q99MV7 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Rnf17Q99MV7 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf17Q99MV7 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf17Q99MV7 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf17Q99MV7 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Rnf17Q99MV7 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf17Q99MV7 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf17Q99MV7 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf17Q99MV7 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms