Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smarcd2Q99JR8 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smarcd2Q99JR8 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smarcd2Q99JR8 Gm9996-201ENSMUST00000070359 913 ntBASIC12.75□□□□□ -0.37
Smarcd2Q99JR8 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Smarcd2Q99JR8 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smarcd2Q99JR8 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Smarcd2Q99JR8 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.75□□□□□ -0.37
Smarcd2Q99JR8 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smarcd2Q99JR8 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC12.75□□□□□ -0.37
Smarcd2Q99JR8 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smarcd2Q99JR8 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Smarcd2Q99JR8 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcd2Q99JR8 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcd2Q99JR8 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Smarcd2Q99JR8 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcd2Q99JR8 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Smarcd2Q99JR8 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcd2Q99JR8 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcd2Q99JR8 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcd2Q99JR8 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcd2Q99JR8 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcd2Q99JR8 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcd2Q99JR8 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC12.74□□□□□ -0.37
Smarcd2Q99JR8 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Smarcd2Q99JR8 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcd2Q99JR8 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC12.74□□□□□ -0.37
Smarcd2Q99JR8 Gm5732-201ENSMUST00000182596 1007 ntBASIC12.74□□□□□ -0.37
Smarcd2Q99JR8 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC12.74□□□□□ -0.37
Smarcd2Q99JR8 Gm18393-201ENSMUST00000208349 1131 ntBASIC12.74□□□□□ -0.37
Smarcd2Q99JR8 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC12.74□□□□□ -0.37
Smarcd2Q99JR8 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC12.74□□□□□ -0.37
Smarcd2Q99JR8 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC12.74□□□□□ -0.37
Smarcd2Q99JR8 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcd2Q99JR8 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Smarcd2Q99JR8 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcd2Q99JR8 Gm10702-201ENSMUST00000098929 1268 ntBASIC12.74□□□□□ -0.37
Smarcd2Q99JR8 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcd2Q99JR8 Gm44401-201ENSMUST00000204462 2375 ntBASIC12.74□□□□□ -0.37
Smarcd2Q99JR8 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcd2Q99JR8 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcd2Q99JR8 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcd2Q99JR8 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC12.74□□□□□ -0.37
Smarcd2Q99JR8 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.74□□□□□ -0.37
Smarcd2Q99JR8 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcd2Q99JR8 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Smarcd2Q99JR8 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcd2Q99JR8 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcd2Q99JR8 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcd2Q99JR8 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcd2Q99JR8 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcd2Q99JR8 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcd2Q99JR8 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcd2Q99JR8 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcd2Q99JR8 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Smarcd2Q99JR8 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcd2Q99JR8 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcd2Q99JR8 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.73□□□□□ -0.37
Smarcd2Q99JR8 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC12.73□□□□□ -0.37
Smarcd2Q99JR8 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcd2Q99JR8 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcd2Q99JR8 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC12.73□□□□□ -0.37
Smarcd2Q99JR8 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcd2Q99JR8 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcd2Q99JR8 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.73□□□□□ -0.37
Smarcd2Q99JR8 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC12.73□□□□□ -0.37
Smarcd2Q99JR8 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC12.73□□□□□ -0.37
Smarcd2Q99JR8 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcd2Q99JR8 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcd2Q99JR8 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.73□□□□□ -0.37
Smarcd2Q99JR8 Gm13461-201ENSMUST00000120980 662 ntBASIC12.73□□□□□ -0.37
Smarcd2Q99JR8 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC12.73□□□□□ -0.37
Smarcd2Q99JR8 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC12.73□□□□□ -0.37
Smarcd2Q99JR8 Gm23699-201ENSMUST00000158835 135 ntBASIC12.73□□□□□ -0.37
Smarcd2Q99JR8 Gm9211-201ENSMUST00000182882 975 ntBASIC12.73□□□□□ -0.37
Smarcd2Q99JR8 Gm10109-202ENSMUST00000206890 1211 ntBASIC12.73□□□□□ -0.37
Smarcd2Q99JR8 Gm18556-201ENSMUST00000219748 1031 ntBASIC12.73□□□□□ -0.37
Smarcd2Q99JR8 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcd2Q99JR8 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcd2Q99JR8 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcd2Q99JR8 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcd2Q99JR8 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcd2Q99JR8 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcd2Q99JR8 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcd2Q99JR8 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcd2Q99JR8 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcd2Q99JR8 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Smarcd2Q99JR8 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Smarcd2Q99JR8 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcd2Q99JR8 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcd2Q99JR8 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcd2Q99JR8 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Smarcd2Q99JR8 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Smarcd2Q99JR8 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smarcd2Q99JR8 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Smarcd2Q99JR8 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Smarcd2Q99JR8 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smarcd2Q99JR8 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smarcd2Q99JR8 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smarcd2Q99JR8 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms