Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdk9Q99J95 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdk9Q99J95 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Cdk9Q99J95 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC12.74□□□□□ -0.37
Cdk9Q99J95 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdk9Q99J95 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdk9Q99J95 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC12.74□□□□□ -0.37
Cdk9Q99J95 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC12.74□□□□□ -0.37
Cdk9Q99J95 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdk9Q99J95 Gm44831-201ENSMUST00000208469 2989 ntBASIC12.74□□□□□ -0.37
Cdk9Q99J95 Gm6263-201ENSMUST00000120029 1342 ntBASIC12.74□□□□□ -0.37
Cdk9Q99J95 Gm11400-201ENSMUST00000120853 1214 ntBASIC12.74□□□□□ -0.37
Cdk9Q99J95 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.74□□□□□ -0.37
Cdk9Q99J95 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cdk9Q99J95 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cdk9Q99J95 Gm27390-201ENSMUST00000184516 176 ntBASIC12.74□□□□□ -0.37
Cdk9Q99J95 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdk9Q99J95 AC165157.4-201ENSMUST00000220587 139 ntBASIC12.74□□□□□ -0.37
Cdk9Q99J95 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.74□□□□□ -0.37
Cdk9Q99J95 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdk9Q99J95 Gm20445-201ENSMUST00000061905 565 ntBASIC12.74□□□□□ -0.37
Cdk9Q99J95 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdk9Q99J95 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdk9Q99J95 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdk9Q99J95 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.74□□□□□ -0.37
Cdk9Q99J95 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdk9Q99J95 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Cdk9Q99J95 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC12.74□□□□□ -0.37
Cdk9Q99J95 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC12.74□□□□□ -0.37
Cdk9Q99J95 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC12.74□□□□□ -0.37
Cdk9Q99J95 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC12.74□□□□□ -0.37
Cdk9Q99J95 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdk9Q99J95 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdk9Q99J95 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cdk9Q99J95 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdk9Q99J95 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.73□□□□□ -0.37
Cdk9Q99J95 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdk9Q99J95 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdk9Q99J95 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdk9Q99J95 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cdk9Q99J95 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdk9Q99J95 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Cdk9Q99J95 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdk9Q99J95 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdk9Q99J95 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cdk9Q99J95 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdk9Q99J95 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdk9Q99J95 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cdk9Q99J95 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cdk9Q99J95 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC12.73□□□□□ -0.37
Cdk9Q99J95 Gm44855-201ENSMUST00000205725 362 ntBASIC12.73□□□□□ -0.37
Cdk9Q99J95 AC073947.2-201ENSMUST00000215888 1130 ntBASIC12.73□□□□□ -0.37
Cdk9Q99J95 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.73□□□□□ -0.37
Cdk9Q99J95 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cdk9Q99J95 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC12.73□□□□□ -0.37
Cdk9Q99J95 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdk9Q99J95 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdk9Q99J95 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Cdk9Q99J95 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cdk9Q99J95 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cdk9Q99J95 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Cdk9Q99J95 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Cdk9Q99J95 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Cdk9Q99J95 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdk9Q99J95 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdk9Q99J95 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Cdk9Q99J95 Gm43984-201ENSMUST00000204572 2864 ntBASIC12.73□□□□□ -0.37
Cdk9Q99J95 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Cdk9Q99J95 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.73□□□□□ -0.37
Cdk9Q99J95 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdk9Q99J95 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdk9Q99J95 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cdk9Q99J95 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cdk9Q99J95 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC12.72□□□□□ -0.37
Cdk9Q99J95 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdk9Q99J95 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdk9Q99J95 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cdk9Q99J95 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cdk9Q99J95 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC12.72□□□□□ -0.37
Cdk9Q99J95 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC12.72□□□□□ -0.37
Cdk9Q99J95 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.72□□□□□ -0.37
Cdk9Q99J95 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdk9Q99J95 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdk9Q99J95 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cdk9Q99J95 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdk9Q99J95 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cdk9Q99J95 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdk9Q99J95 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Cdk9Q99J95 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cdk9Q99J95 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdk9Q99J95 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Cdk9Q99J95 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Cdk9Q99J95 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC12.72□□□□□ -0.37
Cdk9Q99J95 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC12.72□□□□□ -0.37
Cdk9Q99J95 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.72□□□□□ -0.37
Cdk9Q99J95 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdk9Q99J95 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdk9Q99J95 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdk9Q99J95 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdk9Q99J95 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms