Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rfc4Q99J62 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Rfc4Q99J62 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Rfc4Q99J62 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Rfc4Q99J62 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Rfc4Q99J62 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC14.54□□□□□ -0.08
Rfc4Q99J62 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC14.54□□□□□ -0.08
Rfc4Q99J62 Gm27627-201ENSMUST00000183644 150 ntBASIC14.54□□□□□ -0.08
Rfc4Q99J62 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC14.54□□□□□ -0.08
Rfc4Q99J62 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC14.54□□□□□ -0.08
Rfc4Q99J62 AC141438.2-201ENSMUST00000215068 271 ntBASIC14.54□□□□□ -0.08
Rfc4Q99J62 Gm39404-201ENSMUST00000216350 313 ntBASIC14.54□□□□□ -0.08
Rfc4Q99J62 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Rfc4Q99J62 AC135114.1-201ENSMUST00000228682 270 ntBASIC14.54□□□□□ -0.08
Rfc4Q99J62 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rfc4Q99J62 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC14.54□□□□□ -0.08
Rfc4Q99J62 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Rfc4Q99J62 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Rfc4Q99J62 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rfc4Q99J62 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rfc4Q99J62 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rfc4Q99J62 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rfc4Q99J62 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.54□□□□□ -0.08
Rfc4Q99J62 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Rfc4Q99J62 Gm43570-201ENSMUST00000199951 3688 ntBASIC14.53□□□□□ -0.08
Rfc4Q99J62 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
Rfc4Q99J62 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rfc4Q99J62 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rfc4Q99J62 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Rfc4Q99J62 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rfc4Q99J62 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rfc4Q99J62 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC14.53□□□□□ -0.08
Rfc4Q99J62 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rfc4Q99J62 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC14.53□□□□□ -0.08
Rfc4Q99J62 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rfc4Q99J62 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rfc4Q99J62 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rfc4Q99J62 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC14.53□□□□□ -0.08
Rfc4Q99J62 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Rfc4Q99J62 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Rfc4Q99J62 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
Rfc4Q99J62 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rfc4Q99J62 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Rfc4Q99J62 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rfc4Q99J62 Gm13315-201ENSMUST00000120376 991 ntBASIC14.53□□□□□ -0.08
Rfc4Q99J62 Gm15782-201ENSMUST00000121073 445 ntBASIC14.53□□□□□ -0.08
Rfc4Q99J62 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC14.53□□□□□ -0.08
Rfc4Q99J62 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC14.53□□□□□ -0.08
Rfc4Q99J62 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rfc4Q99J62 Gm5732-201ENSMUST00000182596 1007 ntBASIC14.53□□□□□ -0.08
Rfc4Q99J62 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC14.53□□□□□ -0.08
Rfc4Q99J62 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC14.53□□□□□ -0.08
Rfc4Q99J62 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rfc4Q99J62 AC125209.1-201ENSMUST00000225812 766 ntBASIC14.53□□□□□ -0.08
Rfc4Q99J62 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rfc4Q99J62 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Rfc4Q99J62 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Rfc4Q99J62 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rfc4Q99J62 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rfc4Q99J62 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rfc4Q99J62 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Rfc4Q99J62 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rfc4Q99J62 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rfc4Q99J62 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Rfc4Q99J62 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rfc4Q99J62 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Rfc4Q99J62 AC238940.1-201ENSMUST00000225106 1858 ntBASIC14.52□□□□□ -0.08
Rfc4Q99J62 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rfc4Q99J62 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rfc4Q99J62 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Rfc4Q99J62 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.08
Rfc4Q99J62 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rfc4Q99J62 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Rfc4Q99J62 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Rfc4Q99J62 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Rfc4Q99J62 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rfc4Q99J62 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Rfc4Q99J62 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Rfc4Q99J62 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Rfc4Q99J62 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rfc4Q99J62 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rfc4Q99J62 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rfc4Q99J62 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rfc4Q99J62 Gm10176-201ENSMUST00000159707 2264 ntBASIC14.52□□□□□ -0.08
Rfc4Q99J62 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC14.52□□□□□ -0.08
Rfc4Q99J62 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Rfc4Q99J62 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Rfc4Q99J62 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rfc4Q99J62 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rfc4Q99J62 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rfc4Q99J62 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC14.52□□□□□ -0.09
Rfc4Q99J62 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC14.52□□□□□ -0.09
Rfc4Q99J62 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Rfc4Q99J62 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC14.52□□□□□ -0.09
Rfc4Q99J62 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
Rfc4Q99J62 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC14.52□□□□□ -0.09
Rfc4Q99J62 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC14.52□□□□□ -0.09
Rfc4Q99J62 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
Rfc4Q99J62 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Rfc4Q99J62 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC14.52□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms