Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Rnf17-202ENSMUST00000223627 2077 ntBASIC13.43□□□□□ -0.26
Pcdha9Q91Y11 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdha9Q91Y11 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdha9Q91Y11 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdha9Q91Y11 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Pcdha9Q91Y11 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdha9Q91Y11 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdha9Q91Y11 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC13.42□□□□□ -0.26
Pcdha9Q91Y11 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdha9Q91Y11 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdha9Q91Y11 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdha9Q91Y11 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
Pcdha9Q91Y11 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdha9Q91Y11 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdha9Q91Y11 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Pcdha9Q91Y11 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdha9Q91Y11 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdha9Q91Y11 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC13.42□□□□□ -0.26
Pcdha9Q91Y11 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdha9Q91Y11 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC13.42□□□□□ -0.26
Pcdha9Q91Y11 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC13.42□□□□□ -0.26
Pcdha9Q91Y11 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdha9Q91Y11 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC13.42□□□□□ -0.26
Pcdha9Q91Y11 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Pcdha9Q91Y11 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdha9Q91Y11 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdha9Q91Y11 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC13.42□□□□□ -0.26
Pcdha9Q91Y11 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdha9Q91Y11 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Pcdha9Q91Y11 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdha9Q91Y11 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdha9Q91Y11 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdha9Q91Y11 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdha9Q91Y11 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdha9Q91Y11 Gm27194-201ENSMUST00000175753 2936 ntBASIC13.42□□□□□ -0.26
Pcdha9Q91Y11 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Pcdha9Q91Y11 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdha9Q91Y11 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdha9Q91Y11 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdha9Q91Y11 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdha9Q91Y11 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdha9Q91Y11 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdha9Q91Y11 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdha9Q91Y11 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdha9Q91Y11 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdha9Q91Y11 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC13.41□□□□□ -0.26
Pcdha9Q91Y11 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdha9Q91Y11 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdha9Q91Y11 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Pcdha9Q91Y11 Gm26616-202ENSMUST00000195676 3107 ntBASIC13.41□□□□□ -0.26
Pcdha9Q91Y11 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Pcdha9Q91Y11 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdha9Q91Y11 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdha9Q91Y11 Gm13342-201ENSMUST00000121055 207 ntBASIC13.41□□□□□ -0.26
Pcdha9Q91Y11 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdha9Q91Y11 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC13.41□□□□□ -0.26
Pcdha9Q91Y11 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC13.41□□□□□ -0.26
Pcdha9Q91Y11 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdha9Q91Y11 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC13.41□□□□□ -0.26
Pcdha9Q91Y11 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC13.41□□□□□ -0.26
Pcdha9Q91Y11 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
Pcdha9Q91Y11 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC13.41□□□□□ -0.26
Pcdha9Q91Y11 Gm43630-201ENSMUST00000201550 776 ntBASIC13.41□□□□□ -0.26
Pcdha9Q91Y11 Gm7046-201ENSMUST00000221351 977 ntBASIC13.41□□□□□ -0.26
Pcdha9Q91Y11 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdha9Q91Y11 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Pcdha9Q91Y11 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC13.41□□□□□ -0.26
Pcdha9Q91Y11 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdha9Q91Y11 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC13.41□□□□□ -0.26
Pcdha9Q91Y11 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdha9Q91Y11 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdha9Q91Y11 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdha9Q91Y11 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Pcdha9Q91Y11 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdha9Q91Y11 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdha9Q91Y11 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdha9Q91Y11 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdha9Q91Y11 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdha9Q91Y11 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdha9Q91Y11 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdha9Q91Y11 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdha9Q91Y11 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdha9Q91Y11 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdha9Q91Y11 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdha9Q91Y11 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdha9Q91Y11 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdha9Q91Y11 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdha9Q91Y11 Gm37737-201ENSMUST00000195013 1638 ntBASIC13.4□□□□□ -0.26
Pcdha9Q91Y11 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdha9Q91Y11 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdha9Q91Y11 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdha9Q91Y11 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdha9Q91Y11 Gm12314-201ENSMUST00000118104 538 ntBASIC13.4□□□□□ -0.26
Pcdha9Q91Y11 Gm8908-201ENSMUST00000121633 1024 ntBASIC13.4□□□□□ -0.26
Pcdha9Q91Y11 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdha9Q91Y11 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC13.4□□□□□ -0.26
Pcdha9Q91Y11 Gm9022-201ENSMUST00000182482 992 ntBASIC13.4□□□□□ -0.26
Pcdha9Q91Y11 Gm29396-201ENSMUST00000185659 716 ntBASIC13.4□□□□□ -0.26
Pcdha9Q91Y11 Olfr284-202ENSMUST00000206647 966 ntBASIC13.4□□□□□ -0.26
Pcdha9Q91Y11 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms