Protein–RNA interactions for Protein: Q91Y10

Pcdhac1, Protocadherin alpha C1, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac1Q91Y10 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhac1Q91Y10 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC11.83□□□□□ -0.52
Pcdhac1Q91Y10 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC11.83□□□□□ -0.52
Pcdhac1Q91Y10 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhac1Q91Y10 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhac1Q91Y10 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Pcdhac1Q91Y10 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhac1Q91Y10 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhac1Q91Y10 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhac1Q91Y10 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhac1Q91Y10 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhac1Q91Y10 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Pcdhac1Q91Y10 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhac1Q91Y10 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhac1Q91Y10 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Pcdhac1Q91Y10 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhac1Q91Y10 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhac1Q91Y10 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhac1Q91Y10 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhac1Q91Y10 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhac1Q91Y10 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhac1Q91Y10 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhac1Q91Y10 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhac1Q91Y10 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhac1Q91Y10 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhac1Q91Y10 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhac1Q91Y10 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhac1Q91Y10 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Pcdhac1Q91Y10 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Pcdhac1Q91Y10 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhac1Q91Y10 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC11.82□□□□□ -0.52
Pcdhac1Q91Y10 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhac1Q91Y10 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhac1Q91Y10 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhac1Q91Y10 Gm8213-201ENSMUST00000118191 441 ntBASIC11.82□□□□□ -0.52
Pcdhac1Q91Y10 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC11.82□□□□□ -0.52
Pcdhac1Q91Y10 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC11.82□□□□□ -0.52
Pcdhac1Q91Y10 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC11.82□□□□□ -0.52
Pcdhac1Q91Y10 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC11.82□□□□□ -0.52
Pcdhac1Q91Y10 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC11.82□□□□□ -0.52
Pcdhac1Q91Y10 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC11.82□□□□□ -0.52
Pcdhac1Q91Y10 Gm42929-201ENSMUST00000198374 1286 ntBASIC11.82□□□□□ -0.52
Pcdhac1Q91Y10 Gm44069-201ENSMUST00000204898 506 ntBASIC11.82□□□□□ -0.52
Pcdhac1Q91Y10 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC11.82□□□□□ -0.52
Pcdhac1Q91Y10 Gm5035-201ENSMUST00000215581 927 ntBASIC11.82□□□□□ -0.52
Pcdhac1Q91Y10 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhac1Q91Y10 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Pcdhac1Q91Y10 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhac1Q91Y10 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhac1Q91Y10 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhac1Q91Y10 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhac1Q91Y10 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhac1Q91Y10 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhac1Q91Y10 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC11.82□□□□□ -0.52
Pcdhac1Q91Y10 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhac1Q91Y10 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhac1Q91Y10 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC11.82□□□□□ -0.52
Pcdhac1Q91Y10 Gm9279-201ENSMUST00000223175 1606 ntBASIC11.82□□□□□ -0.52
Pcdhac1Q91Y10 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhac1Q91Y10 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhac1Q91Y10 Gm43051-201ENSMUST00000201096 2678 ntBASIC11.82□□□□□ -0.52
Pcdhac1Q91Y10 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhac1Q91Y10 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhac1Q91Y10 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhac1Q91Y10 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhac1Q91Y10 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhac1Q91Y10 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhac1Q91Y10 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Pcdhac1Q91Y10 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhac1Q91Y10 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhac1Q91Y10 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Pcdhac1Q91Y10 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhac1Q91Y10 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhac1Q91Y10 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
Pcdhac1Q91Y10 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC11.81□□□□□ -0.52
Pcdhac1Q91Y10 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhac1Q91Y10 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhac1Q91Y10 Adra1a-206ENSMUST00000225182 2337 ntBASIC11.81□□□□□ -0.52
Pcdhac1Q91Y10 Gm37269-201ENSMUST00000193906 1891 ntBASIC11.81□□□□□ -0.52
Pcdhac1Q91Y10 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Pcdhac1Q91Y10 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhac1Q91Y10 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhac1Q91Y10 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhac1Q91Y10 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhac1Q91Y10 Gm16202-201ENSMUST00000117532 544 ntBASIC11.81□□□□□ -0.52
Pcdhac1Q91Y10 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC11.81□□□□□ -0.52
Pcdhac1Q91Y10 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC11.81□□□□□ -0.52
Pcdhac1Q91Y10 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhac1Q91Y10 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhac1Q91Y10 Gm9124-201ENSMUST00000191789 1092 ntBASIC11.81□□□□□ -0.52
Pcdhac1Q91Y10 Gm9113-201ENSMUST00000192510 1018 ntBASIC11.81□□□□□ -0.52
Pcdhac1Q91Y10 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC11.81□□□□□ -0.52
Pcdhac1Q91Y10 Gm9131-201ENSMUST00000193557 1089 ntBASIC11.81□□□□□ -0.52
Pcdhac1Q91Y10 Gm9121-201ENSMUST00000193749 1071 ntBASIC11.81□□□□□ -0.52
Pcdhac1Q91Y10 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhac1Q91Y10 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC11.81□□□□□ -0.52
Pcdhac1Q91Y10 AC154305.4-201ENSMUST00000224520 614 ntBASIC11.81□□□□□ -0.52
Pcdhac1Q91Y10 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhac1Q91Y10 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhac1Q91Y10 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 318.6 ms